Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01205 ATGGCTGCTGCAGAACAAGTTCTGAGATTGTTTGATTCCTTCTGGTTCGAGGCTTCAATTCTCGCCATCAAAACCCCTTCAATATCTCACAGCGACAAGGTGGAGGAAGTGCTTCCTCCTGATGCAAAGCTTTCACTGGTTCCAACTCCAACCCTTGAAGTTAGATCCTACAGTGATCAAAACTTGGACTCCTCATCAAGTATTTTGTGTGATTCTCCTTCACCGAATTCTGTGCTCACCCTCAGAAGGCTGAGGACAATCCCTTCTGAGAGGGAAATCATGGAATTCTCTGGTGGAAACCATGAAAAGGAAGGTGTAAACTTTAAGAGAAAACAAAAGGGGTTTGGTCATGGAAGAAGGCTCAGGAGAGAGAGAGCCAGCAGGAGCCTATCTGAGCTTGAGTTTAAGGAGCTAAAAGGGTTTATGGATTTGGGGTTTGTGTTTTCTGAAGAGGACAAGGATTCAAAACTGGTTTCTCTGATACCTGGCTTG 492 0.4492 MAAAEQVLRLFDSFWFEASILAIKTPSISHSDKVEEVLPPDAKLSLVPTPTLEVRSYSDQNLDSSSSILCDSPSPNSVLTLRRLRTIPSEREIMEFSGGNHEKEGVNFKRKQKGFGHGRRLRRERASRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01205 164 PANTHER OS06G0550800 PROTEIN 3 164 - -
Vimu5g01205 164 Pfam Protein of unknown function (DUF1685) 136 164 IPR012881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01205 Vimu-Chr5 21031094 21031861 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01205 - - gmx:100811994 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01205 5 21031094 21031861 Vimu5g01205 5 21031094 21031861 ECH
Vimu2g00806 2 4938940 4940466 Vimu5g01205 5 21031094 21031861 ECH
Vimu4g01187 4 10648703 10649449 Vimu5g01205 5 21031094 21031861 PCT