Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01187 ATGGATGCAGAACAAGTTCTGAAATTGTTGGATACTTTCTGGTTTCAGACAACAATTTTCACCAACAAAACCTCGTCACCTTTTCATGCGACAGCGGACACAACATCTCAGTCCCTTGTGAAAGAAGTGCTTCCTTTTGATTCAAAGCTCATCAGAGTTTCAACCCTGCAACTGAGGTCTCTTAGTGACCAAAACTTGGGGTCAAGTATGGCTGTTTTTACTGATTTTCCATCACCAAATTCTGTCCTCACACCACCGAAGCTGATGCCAATTCTTTCTGGGAAGGAAGTGGGAGATTTTCCACCGGAAAAAGGTAACGGAAAGAATGAAGATGAACAATTAGTCACTACCAAAAAAGTGTGTCACAGTGATAGAAGAAAAAGAAGAAGAAGTTTCAGAAAAGGAAAAGCAACAAGAAGCCTCTCAGACCTTGAGTTCAAGGAGCTAAAAGGGTTTATGGATTTGGGTTTTGTGTTTTCTGAGGAGGACAAAGACTCAAGATTGGTTTCTCTGATTCCAGGGTTGCAAAGGCTAGGAAGAGAAGATACAGAAGAATTGAGTTCACAACATAACATTGATGAAACTGTGATTTGCAGGCCTTATTTGTCAGAAGCTTGGGGTGTTTTAGACCAAAAGAAATATGTGAATCCATTGATAAATTGGAGGGTACCAGTTGTAGGAAATGAGATAGACATGAAGGACAATCTCAGGTTCTGGGCTCATACAGTAGCATCCATTGTAAGATAA 747 0.4043 MDAEQVLKLLDTFWFQTTIFTNKTSSPFHATADTTSQSLVKEVLPFDSKLIRVSTLQLRSLSDQNLGSSMAVFTDFPSPNSVLTPPKLMPILSGKEVGDFPPEKGNGKNEDEQLVTTKKVCHSDRRKRRRSFRKGKATRSLSDLEFKELKGFMDLGFVFSEEDKDSRLVSLIPGLQRLGREDTEELSSQHNIDETVICRPYLSEAWGVLDQKKYVNPLINWRVPVVGNEIDMKDNLRFWAHTVASIVR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01187 248 Pfam Protein of unknown function (DUF1685) 146 175 IPR012881 -
Vimu4g01187 248 PANTHER OS06G0550800 PROTEIN 2 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01187 Vimu-Chr4 10648703 10649449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01187 - - vum:124820766 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01187 4 10648703 10649449 Vimu4g01187 4 10648703 10649449 ECH
Vimu4g01187 4 10648703 10649449 Vimu5g01205 5 21031094 21031861 PCT