Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01167 ATGATACTGAAAGATCTAATGGAAGAAAAGCAGTTGAATTTTAACCAGCCACTTTTATCAGTGAGGCGTTTCTCATCAACAGGGGCCAATGAAGGAGACCGCAGAAGCAAAACTGATTACTCATTAGCCAGACTTCCACCTCCTCTTGCTTACCATTCAGAGTTAAAGTCAGTTCCAGTGAGGAATGCTGGAACTGTTCCTTTTGTGTGGGAGAAAGCCCCAGGAAAACCCAAAGATGAAACCAAGTTACAGACACAAGCTGCTGAGCAGCCTCTCGGGAGAGTATCAGAAATCAAGCAACAATCAGTTACTGAGATGAGAACCGGAAGCTCCTTTTTTTCCAACTCTCAAAGGGTTGCATCTTTCAATAAAAGAGTAGCAAAATATTCAAAAGATGGAAATACGGAGAAAGAAAGTTCTTATTCAGATGATGGAGATGAATCCTATAAAGATGCTCTCGACACACTTTCCAGGAGTGAGTCATTCTTCACGAGCTGTAGTTTATCTGGTTTGAGTGGTTGGGAGGAACAAGAGGCTCAATCATATGGGAGTTTCTCAAGTGATCATCGACAAGCTCGTGATTTCATGATTGATAGGTTCTTGCCTGCAGCAACATCAGAAGCACCACATCATGTGTCCAAGAAGGAACTTGTTGGACAAGAACAACAAAAACAGAAAAAGAGACAAGCGAACTTAGAAGAAAGTGATGACTGCAATGAATACGAAAAATCCAGAACTACTACTTGTGGGCTATTTCCTCGGTTCTGTCTTTTGAATCCAATACCTGGATTAACAATGGATAAAGTTCAAAGAAATGCAGCTCATGGAATGCATGCTAAATCAGGTGCTTCTTACATTGGATCTACAAAAGGGCAAGTTACAGATAAAAAAGAGATTTTGGATATTCTAGTAAAATCTAGACATGGCACCGATCCACATCAAAGAGTTCGCAGAAAAATAGTATCCTGTGAGAGTAGTCAACATGATTATGAAAGCCAAGTTCATGAGAAAAAAACAACGTATGTAGATTCTGTAAATAAGGTCACCTCTCAAACCAATACCAGAGGGGGTGATTATGAGACTTGGAGAAGAGATAATGGTGTTTACAACAATCCTTCAATAGATTCAAGTTCTGAAATGATTGCATTTAAGGAGATAATAAATTCAGAAAGTCAAGGGTACAGCAGGATAAACAATTCTAATAGCCTCAATCAAAATTCAGAAGTTGAGTTGAAGAGCCATTTATCAGCCAAATGGGTAGATAAAGAATGTTGTATGGATAGCTCAAAGGTAAGATATGATGGGAAGATTGCCTTAGAGAGACAACGTTTTACAGAGTCGGGTGACCAAGAAACATCCGGTGCAAGCTGTTTTGGACTTCCTTTGGTCCTACCTTCACTAAAAGCTCCATCAGAGTCTTGGCTTAAGCGCACTTTACCTACCATTTCCAAAAACAACGTGACTTCACGGTCTAGCTTTATCGCAAACCTTCATGCACAATGTCACTCTCCAGACAACATCATTTTACCTTAA 1533 0.3986 MILKDLMEEKQLNFNQPLLSVRRFSSTGANEGDRRSKTDYSLARLPPPLAYHSELKSVPVRNAGTVPFVWEKAPGKPKDETKLQTQAAEQPLGRVSEIKQQSVTEMRTGSSFFSNSQRVASFNKRVAKYSKDGNTEKESSYSDDGDESYKDALDTLSRSESFFTSCSLSGLSGWEEQEAQSYGSFSSDHRQARDFMIDRFLPAATSEAPHHVSKKELVGQEQQKQKKRQANLEESDDCNEYEKSRTTTCGLFPRFCLLNPIPGLTMDKVQRNAAHGMHAKSGASYIGSTKGQVTDKKEILDILVKSRHGTDPHQRVRRKIVSCESSQHDYESQVHEKKTTYVDSVNKVTSQTNTRGGDYETWRRDNGVYNNPSIDSSSEMIAFKEIINSESQGYSRINNSNSLNQNSEVELKSHLSAKWVDKECCMDSSKVRYDGKIALERQRFTESGDQETSGASCFGLPLVLPSLKAPSESWLKRTLPTISKNNVTSRSSFIANLHAQCHSPDNIILP 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01167 510 MobiDBLite consensus disorder prediction 71 92 - -
Vimu4g01167 510 Pfam Protein of unknown function (DUF688) 224 419 IPR007789 -
Vimu4g01167 510 Pfam Protein of unknown function (DUF688) 7 227 IPR007789 -
Vimu4g01167 510 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 7 497 - -
Vimu4g01167 510 MobiDBLite consensus disorder prediction 209 239 - -
Vimu4g01167 510 MobiDBLite consensus disorder prediction 206 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01167 Vimu-Chr4 10416186 10417803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01167 - - var:108333741 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01167 4 10416186 10417803 Vimu4g01167 4 10416186 10417803 ECH
Vimu4g01167 4 10416186 10417803 Vimu5g01238 5 21985744 21988060 PCT