Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01149 ATGTCAATCTTAAGGCTCAGTGGAGCTGACCCTATTACCTTCTCTCTCTCTCTTCACAGTACTCTTCTTCTTGGTTGCAATTTCTCTTCAATTTTACTACTTTATCCTTCTCATGACTTCTTCAGTCAGACGCTGATACTGCTCTTGTTTCTGTGCGCGTTACAACATGATGCTAGTTTATTCTTACAGGTTGCTGTTGAGTTTGGCACTTGTATTGTGATGGCTATGGGTGTGAAATGCATAACATGGGTTGGGAACATGTTCCAGAAGTTTGAGGATATTTGTGTGGATGTGGACGACTCAGTGTTTGAGGAAACTGTTAATTACTTAGGGAATCAGATGCAGACTGTTGGGGAAAGTGTTAAAAAGATCTGTTCAGAAGTCATGCAAGATTTACGTCCTCTACCTTCATGTGATTTTGATGAAACATCAGCCTCTGAGTTGCCTATAAATCAAAATACTGATGCTGGCTTAGCTGAGAAGTCTTTTGAAGGTTCCAGGAATATAACTGTAAATGATGGTACCAACCAAACAACCAAGGATTCAAGGATCAGTGATGATGTTGATATTGATGTAATCCATGCCGAATCTTGTGATTCTAATACTTTGTTTATTGCAGCTTCTTGCTATTCTGTCAAAGGGTACAACAAATCAAACCTCGGTGGTGATAAACAAGACAAAAGCATGCCTGCATCCAAGAGTGCCTGTGAAATCACTTTATCAGAAACAGATACACGCAATACATCACAATTATGTGAAGTCTCCGGGATAAATGAAAATCATGCAGACACTGTTTCAAAACCAACTTCCTCTGAATCAATTACCATTGCCTCTTTAGCTGACTGTTGCAACGAAATTGAAAATACAAGCACTAAAGAAATCCTCGATGATCTAGAATGGGCTGAATCAACTGAAGGGAAAGAAAAGCATAGTAGTTCATATTCCTGTGTCTTGTTTGTAGATCCATATGAAACATGGGATTTGGATGTACCAAAGATTGGTACTATAGCTGAGCAAGGCCATAAAACTATGCTACAAGATGATGAATTGAAGCTTGTGGAAACTTGTGTTATGGTTACTAGAGATGAACTTGAATCAGTTCTCAATGCAGAGGGTAATCTAAGAACTAGCAAGAACAAGAAGAGACAACCGTTTTTGTTATCCAAGAAGGCTGCAAGGAGGAAAGAGTATGAAGAGCTTGCAATGTTGCATGGAAACAATGAAAAGGGTGATTTTGCAGAGAGTTTATGTCCAACTTTACAGAATGATCACAAGAAACTACTGCTTCCTGATATATCTGAGTCTGAGTGGGAGGTTCTCTAA 1323 0.39 MSILRLSGADPITFSLSLHSTLLLGCNFSSILLLYPSHDFFSQTLILLLFLCALQHDASLFLQVAVEFGTCIVMAMGVKCITWVGNMFQKFEDICVDVDDSVFEETVNYLGNQMQTVGESVKKICSEVMQDLRPLPSCDFDETSASELPINQNTDAGLAEKSFEGSRNITVNDGTNQTTKDSRISDDVDIDVIHAESCDSNTLFIAASCYSVKGYNKSNLGGDKQDKSMPASKSACEITLSETDTRNTSQLCEVSGINENHADTVSKPTSSESITIASLADCCNEIENTSTKEILDDLEWAESTEGKEKHSSSYSCVLFVDPYETWDLDVPKIGTIAEQGHKTMLQDDELKLVETCVMVTRDELESVLNAEGNLRTSKNKKRQPFLLSKKAARRKEYEELAMLHGNNEKGDFAESLCPTLQNDHKKLLLPDISESEWEVL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01149 440 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vimu4g01149 440 PANTHER BNAA05G11610D PROTEIN 78 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01149 Vimu-Chr4 10109859 10113127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01149 - - vra:106778617 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01149 4 10109859 10113127 Vimu5g01284 5 22802778 22806097 PCT
Vimu5g01238 5 21985744 21988060 Vimu4g01149 4 10109859 10113127 PCT