Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00921 TTGTCTGCATCTGCACTACTTCATCTAGCTCCCTCGTTAATCATGAAAAGGTCACTTCTCAGTCCTATCAAAACCAAACCTACTCTGATGAAATTCATTTTAGTCTTCTCTTCATTTTTTGTCATTTCTCTCTGTGTATCCATGTTACTCCTAGCCACACCAAAGATAATAGACGTGCATTCTTCACTACTATATGTGTATGAGCCTACCACTGTTGATCAACTTGTGTTTGGAATTGCTTCAAGTGGGAATTCGTGGCCTAAGAGAAAGGAATACAGCAGGATGTGGTGGAATTTGAATCCCAATAAAACAATGAGAGGATGTGTTTTCGTAGATACCCTCCCACATGAAGAAAATCTCAACAATGATGGTTCTCTTCCTCCCCTTTGTGTCTCTGAAGACACTTCCCAGTTTCTCTACACTTACAAGCCTGGAGGTCTAAGATCAGCAATCCGTGTGGCACGTGTTGTCAAAGAGACTGTGGCATTGAACCATTCTGGTGTTAGGTGGTATGTGTTTGGGGATGATGACACCATTTTCTTCCCTCACAATCTGCTCAAAACTCTTTCCAAATATGATCACAGGCTTTGGTACTATGTTGGGTCCTACTCAGAGATTTATGAGGGCACTCAGGTTTTTGGTTTTGGAATGGCCTTTGGTGGAGGTGGTTTTGCCATCAGTTCCTCCCTGGCACAAGTCCTAGCCAAGGTTCTTGATTCATGCATACAAAGGTATCCACATCTGTATGGAAGCGATGCTAGGGTCTACTCTTGCATAACTGAACTAGGTGTCGGATTAACACATGAACCAGGTTTTCATCAGGTCGATTTGCGGGGAAATATCTTTGGCCTTTTGGCTTCTCATCCGTTAACTCCCTTATTGTCCTTACATCACCCAGATCACACTGATCCTATCTTTCCCAACATGTCAACCAAAAAATCACTGCAACATTTATTTGAAGCTGTTCATGTCGATTCCGAGAGGATCCTGCAACAAACAGTTTGTTACGAAAAGAGGTTGTCATGGACAATTTCAGTTTCATGGGGCTATGCTGTTCAAGTGTTCCAGAACAACATGGTTTTGCCTGAGGTTGTGAGAGTGGAGAAAACATTCAAACAATGGAAGGAAGGAAATGTTTTGTTAGGAACATACACTTTCAACACAAGAGAACTTCACCCTGACCCATGTAAAAGACCCACCATTTTCTATCTAGATAAAGTGTTTTCTGGCAAAGATGGCATCACAAGCACTTACAGGAAACATTCTCAAAATTGCACATACAAGGGACCAATGCAGAAATTGAATGTGATCAAAGTTGCTACAAATAAGTTATACATTGACAACAAACAGACTCCGAGAAGGCACTGTTGTGATGTGTTGCCCTCTAATGCTGGTGACTTAATGGAAGTTGCAATCAGAGAATGCAGATATGAAGAACTGATTTACATGAACTGA 1455 0.4151 MSASALLHLAPSLIMKRSLLSPIKTKPTLMKFILVFSSFFVISLCVSMLLLATPKIIDVHSSLLYVYEPTTVDQLVFGIASSGNSWPKRKEYSRMWWNLNPNKTMRGCVFVDTLPHEENLNNDGSLPPLCVSEDTSQFLYTYKPGGLRSAIRVARVVKETVALNHSGVRWYVFGDDDTIFFPHNLLKTLSKYDHRLWYYVGSYSEIYEGTQVFGFGMAFGGGGFAISSSLAQVLAKVLDSCIQRYPHLYGSDARVYSCITELGVGLTHEPGFHQVDLRGNIFGLLASHPLTPLLSLHHPDHTDPIFPNMSTKKSLQHLFEAVHVDSERILQQTVCYEKRLSWTISVSWGYAVQVFQNNMVLPEVVRVEKTFKQWKEGNVLLGTYTFNTRELHPDPCKRPTIFYLDKVFSGKDGITSTYRKHSQNCTYKGPMQKLNVIKVATNKLYIDNKQTPRRHCCDVLPSNAGDLMEVAIRECRYEELIYMN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00921 484 Gene3D - 66 324 - -
Vimu4g00921 484 PANTHER FRINGE-RELATED 32 481 - -
Vimu4g00921 484 FunFam Fringe-related protein-like 64 323 - -
Vimu4g00921 484 Pfam Protein of unknown function, DUF604 212 457 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00921 Vimu-Chr4 7600160 7602114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00921 29 450 Glycosyltransferase AT1G05280 50.922 4.74e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00921 - - gmx:100779943 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01565 5 27117553 27130900 Vimu4g00921 4 7600160 7602114 PCT