Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00649 ATGGATCGTGCCATGTCTATCCAAGCCTTTGCTCACAGCTTATTCATTCTCATTGTTTTACTCTTCCCCTCAGCAATGTCTGAGGAGTTTGACTATGATCCTTCAAGTCCAAATGGCCCCTCTAACTGGGGAAATACGTGGCCTTTGTGTAGAGATGGAATCAGACAATCTCCTATTAACCTATTCACGCCGAATGTTGTCTTCGGTTCTGGGATTCAAAGAAACTATCAACCTGCCAACGCCACTCTTGTTACTTCCGAACATGACGTAATGATAAACTGGACTGAGAATGCAGGGAATATTATAATTAACGGAACTCAATACAACCTACTACAAGCTCATTGGCACTCTCCCTCTGAACACACAATCAACGGCATAAGGTATGATCTAGAGTTACACATGGTGCATAGAAGTTTAGCTGGAAATATTGCAGTGACTGGAGTTTTATCGAGACATGGGATTCCAGATACCTTCATTTCAACGATAGAAGATGAGTTACAGGTTCTGGCTGGAAACCAGACGAGAGAAATACCAATAGGTGTTGCTGATCCAGACGATGTAGCAGGGATAACAGGAAACAAGTATTTTAGATATAATGGTTCTCTTACAGTTCCTCCTTGCAATGAAAATGTTCTTTGGACTGTTTTCACTGGAGAGGGCAAAACAGTCTCAAGGGCGCAAAAAGAGTTGATTCGAGCAGCAGTTGATGGAGCTGGTGATGAAACATTTGAGAATGCTAGACCAGTGCAACCAAGAAACGGTCGTCCAGTGAAACTCTACTTACATACAAATGGAAATTGA 801 0.422 MDRAMSIQAFAHSLFILIVLLFPSAMSEEFDYDPSSPNGPSNWGNTWPLCRDGIRQSPINLFTPNVVFGSGIQRNYQPANATLVTSEHDVMINWTENAGNIIINGTQYNLLQAHWHSPSEHTINGIRYDLELHMVHRSLAGNIAVTGVLSRHGIPDTFISTIEDELQVLAGNQTREIPIGVADPDDVAGITGNKYFRYNGSLTVPPCNENVLWTVFTGEGKTVSRAQKELIRAAVDGAGDETFENARPVQPRNGRPVKLYLHTNGN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00649 266 CDD alpha_CA_prokaryotic_like 39 259 IPR041891 -
Vimu4g00649 266 Gene3D Alpha carbonic anhydrase 26 264 IPR036398 -
Vimu4g00649 266 PANTHER CARBONIC ANHYDRASE 28 255 IPR023561 GO:0004089|GO:0008270
Vimu4g00649 266 SMART Carb_anhydrase_2a 32 261 IPR001148 -
Vimu4g00649 266 ProSiteProfiles Alpha-carbonic anhydrases profile. 28 261 IPR001148 -
Vimu4g00649 266 Pfam Eukaryotic-type carbonic anhydrase 38 258 IPR001148 -
Vimu4g00649 266 ProSitePatterns Alpha-carbonic anhydrases signature. 119 135 IPR018338 GO:0004089|GO:0008270
Vimu4g00649 266 SUPERFAMILY Carbonic anhydrase 29 260 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00649 Vimu-Chr4 4955998 4959916 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00649 K01674 - gmx:102660002 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00649 4 4955998 4959916 Vimu5g01893 5 30785180 30787891 PCT