Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00632 ATGAGCGAGACGAGTTCATCGGCGCATGACCCCGAGCCTCCTATCCGGCTCAACCTGCCTCCCCTCTCACCGAGCCTCTTCGACGCGGAACCATCGGAGCTCCAACAACCCAATGGATCCGCTGTCCGAAACTCCTCTGATCCCTCTAGCCCTACTAGCAGCGGTTACGCCGCCGAGCAGGGTAGCAGCACCGCCACAATTGTCACCCAGGTCGAAGAGGTCCTTCATAACGAAATTCAGGAGATCACCATCGACGATCCCCAACCTCTCTCTCACTCCTCCCGACTTCCCGGAAAACGACACAGCGATGAGGATGATGCTTCCATTTCATGGAGGAGAAGGAAGAAGCATTTTTTTGTTCTCAGTCATTCTGGCAAACCAATATATTCTAGGTACGGAGATGAACACAAGCTTGCTGGTTTTTCGGCAACTTTGCAAGCAATCATTTCCTTTGTGGAAAATGGGGGTGATCATGTGAAATTGGTGAGGGCCGGAAAGCATCAGGTGGTTTTTCTTGTAAAAGGACCAATTTACTTGGTCTGCATCAGCTGCACGGAAGAACCCTATGAGTCACTAAGGGGACAGTTGGAGCTTTTTCATGGCCAGATTATTGTTATACTAACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACCTTGTTTTCTCTTCACTAGTCCACTCTTTTAGTTGGAACCCAGCTACATTTCTTCATGCCTATACTTGTCTGCCTCTTGCATATGCAACAAGGCAAGCTGCTAGTGCCATCTTGCACGACGTTACTGATTCTGGTGTTCTGTTTGCAATTCTGATGTGCCGACATAAGGTAATCAGTTTAGTTGGTGCTCAGAAAGCCTCTCTTCATCCAGATGATATGCTGCTCTTGGCCAACTTTGTCATGTCGTCTGAGTCCTTTAGGCAAGACTTCAGAAGCATTTTCTCCTGTTTGCTTGCCACGGTACAATGCTTTGGCATTTCTGATGATACGTATTTGATGCTGCTGACCACGAGTTCTGATGCATTTTACCATCTTAAGGATTGTAGGATTAGTATTGAAACTGTCCTTGTGAAGTCAAATGTCCTCAGTGAAGCTCAGAGATCCTTGGTAGATGGTGGGATGCGTGTGGAGGATCTTCCTCCCTTACCTTATTCAGGATCTTCACATTTAGGTCAGCATAGGCTTCCATCAGATTCTCCTGAAAGATTAAGAGAACCTGATTGTGGCATTGGTGGTGCTGCTGGGTTGTGGCATTTCATATATCGTAGCATTTATCTAGATCAATATATATCCTCAGAGTTCTCATCACCTATTAATACTCCTAAGCAGCAGAAAAGATTGTATAGAGCTTACCAAAAACTTTTTGCATCCATGCATGATAAAGGACTTGGGCCACACAAAACCCAGTTTAGAAGGGATGAAAACTACGGTAACTATTTTTTTGTTCTTGGCTCTGTAGAAGGGATAGTACTGCTTTGTTGGGTAACACAGGATTTTGAGCTTTATGCTGCATTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCAATCGGGTGTGTCAATGGGTAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGTTAGTCCCTTTTCGTGGTGA 1662 0.4507 MSETSSSAHDPEPPIRLNLPPLSPSLFDAEPSELQQPNGSAVRNSSDPSSPTSSGYAAEQGSSTATIVTQVEEVLHNEIQEITIDDPQPLSHSSRLPGKRHSDEDDASISWRRRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDHVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLELFHGQIIVILTKSVNRCFEKNPKFDMTPLLGGTDLVFSSLVHSFSWNPATFLHAYTCLPLAYATRQAASAILHDVTDSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRQDFRSIFSCLLATVQCFGISDDTYLMLLTTSSDAFYHLKDCRISIETVLVKSNVLSEAQRSLVDGGMRVEDLPPLPYSGSSHLGQHRLPSDSPERLREPDCGIGGAAGLWHFIYRSIYLDQYISSEFSSPINTPKQQKRLYRAYQKLFASMHDKGLGPHKTQFRRDENYGNYFFVLGSVEGIVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGVSPFSW 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00632 553 Pfam Third Longin domain of FUZ, MON1 and HPS1 426 539 IPR043970 GO:0016192
Vimu4g00632 553 MobiDBLite consensus disorder prediction 1 63 - -
Vimu4g00632 553 PANTHER SAND PROTEIN-RELATED 36 550 IPR004353 GO:0006623
Vimu4g00632 553 MobiDBLite consensus disorder prediction 80 107 - -
Vimu4g00632 553 Pfam First Longin domain of FUZ, MON1 and HPS1 116 236 IPR043972 GO:0016192
Vimu4g00632 553 MobiDBLite consensus disorder prediction 29 63 - -
Vimu4g00632 553 Pfam Second Longin domain of FUZ, MON1 and HPS1 277 335 IPR043971 GO:0016192
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 168 182 IPR004353 GO:0006623
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 342 368 IPR004353 GO:0006623
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 502 516 IPR004353 GO:0006623
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 518 531 IPR004353 GO:0006623
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 116 133 IPR004353 GO:0006623
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 248 269 IPR004353 GO:0006623
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 272 285 IPR004353 GO:0006623
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 134 154 IPR004353 GO:0006623
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 531 551 IPR004353 GO:0006623
Vimu4g00632 553 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 219 231 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00632 Vimu-Chr4 4696937 4702564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00632 K20195 - gmx:100816794 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00632 4 4696937 4702564 Vimu4g00632 4 4696937 4702564 ECH
Vimu4g00632 4 4696937 4702564 Vimu5g01923 5 31128467 31134417 PCT