Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00590 CCAGTTCTAGGAGGTGGGATATGGTTGGGCACCAGATCTAACGGTACAGAATGTCTGAAGTTCCTTTTGTTGCCGTTGATCATCATAGCAGTGAGCATTATGGTGACTTCCTTGGCCGGTTTAACCGGTGCCTGTTACCGCAACCTGTTACTAATGAGCCTCTACCTCGTGGCCATGATCCTCATAATGCTGGTGTTCCTCGGATTCATCATTTTTGCCTATGCTGTAACGGATAAGGGTTCGGGGAGGGAGACAGAGAACCGCGCTTACTTGGAGTATTATTTGGAGGATTACGAGGGTTGGTTGAAGGAACGCGTGGAAAGTGATGAATATTGGACAAAAATTAGCTCTTGTGTTAAGGAATCTAAGCTTTGTCGGAAACTTGGGAGAACCATTAATGGAGTGCCTCAAACTGCTGAAACCTTCTACTTAAGAAATCTTTCTCCTATTCAGTCTGGATGTTGCAAGCCCCCAACAGAATGTGGTTACAAATATGAGAACGAGACAATGTGGAGTACAGAAGGAGTTTTGGGAAGCAACAACACAGATTGCAAAAAGTGGAACAATGACCAAAACTTGCTTTGCTATGATTGTGATTCATGCAAAGCTGGTGTGCTGGCTACACTGAAGAAAACTTGGAGGAGGGTCTCTGCTGGGATACATTCTAGTGACTCCGCTTGCTCTATTCCAACCAAAAATTGTTCCATCAACTTGCTTGGAAACAATCAGGGCAACCTTCGAGCTTATCGTACAGTTCTAGTTCCATTTGTATCAAAAGCAATTGGCCATCCATTGGCTAAATATGCTTCCCTCGTCATGTGTACTGTACATAACCTGATTGTTTCCAAACAAGTTGATGGAATAATTTTGGTTGCAATAGAGCAAGCATAG 891 0.4366 PVLGGGIWLGTRSNGTECLKFLLLPLIIIAVSIMVTSLAGLTGACYRNLLLMSLYLVAMILIMLVFLGFIIFAYAVTDKGSGRETENRAYLEYYLEDYEGWLKERVESDEYWTKISSCVKESKLCRKLGRTINGVPQTAETFYLRNLSPIQSGCCKPPTECGYKYENETMWSTEGVLGSNNTDCKKWNNDQNLLCYDCDSCKAGVLATLKKTWRRVSAGIHSSDSACSIPTKNCSINLLGNNQGNLRAYRTVLVPFVSKAIGHPLAKYASLVMCTVHNLIVSKQVDGIILVAIEQA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00590 296 Pfam Tetraspanin family 3 220 IPR018499 GO:0016020
Vimu4g00590 296 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 217 274 - -
Vimu4g00590 296 PANTHER TETRASPANIN-8-RELATED 1 217 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00590 Vimu-Chr4 4363491 4368205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00590 1 215 Miscellaneous Gene Families AT5G60220 62.326 5.01e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00590 - - gmx:100820399 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00590 4 4363491 4368205 Vimu4g00590 4 4363491 4368205 ECH
Vimu4g00590 4 4363491 4368205 Vimu5g01993 5 31725176 31729509 PCT