Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00514 ATGGGCACACGCACACCTTTGTTCCGTGATTTTAGAAAGCAAGCTTCTTTCTTCCTCAAGGAAAAATTCAAGACTGCTAGGTTAGCTCTCACTGATGTTACTCCAGCAGAACTCATGACAGAAGAAGTTACAAAAGGAAATCCATGGGCCCCAGATTCTCCAACACTTAGATCAATTTCAAGGGCTGCTTTTGAGCTTGATGATTATTGGAGGATTGTAGAGATTCTGCACAAAAGGGCATCTTACAATTCTCTGATTGTGGTGGAGCACCTGTTGACTCATGGACCAGAAAGTGTTGCAGAGGAATTTCAGAGTGACAAAGATGTAATTAGTCAGATGAAAGATTTCCACTTTACTGATGCGAGTGGGTTCAACTGGGGTGTAACTGTTAGAAAAAAATCAGAATGGATTTTGAAACTCATGGAAGAAGGAACTCTCCTTAAGGAAGAAAGAAACCGTGCTCGGAATTTGTCCAGAGGAATTCAAGGTTTTGGAAGTTTCAGTGAAAGGTCAACTCAAGCACAAGGAGTTCTGCATGAAAAATCATTGCCAGCCACATTTGACAGATCTAACTCTGACTTCAACAACAATCACAGCCAGGAAAACCAGTCATTTGGCTCAAACCATTTTCTGGACACAGCAGCAGTTAAATCTCGCACTCCTAGTCATGAGGGAGGAATTTTCAAGTCTCAAGATGATTGTGTCGAGCCAGAGAGCTACTTGGATGATCATGGAAACGCTCAAATGCATCAGAAATCTGAGACAAGCTCTAAAGAAATGATGACAACTAGCAAGGAGGAATTCCATCTATGGAACTTGAAAGGGGAATCCAATCCACTTTTAGATGGTAACCAAGAGAATGATTCCAGACTTGGTATATTTACAGCCGAAGATTATCACCCCTTTAACTCCAAAGAAATGCATTCCACTTCTTCCCTTCTTCCTTCTGGATGA 954 0.4151 MGTRTPLFRDFRKQASFFLKEKFKTARLALTDVTPAELMTEEVTKGNPWAPDSPTLRSISRAAFELDDYWRIVEILHKRASYNSLIVVEHLLTHGPESVAEEFQSDKDVISQMKDFHFTDASGFNWGVTVRKKSEWILKLMEEGTLLKEERNRARNLSRGIQGFGSFSERSTQAQGVLHEKSLPATFDRSNSDFNNNHSQENQSFGSNHFLDTAAVKSRTPSHEGGIFKSQDDCVEPESYLDDHGNAQMHQKSETSSKEMMTTSKEEFHLWNLKGESNPLLDGNQENDSRLGIFTAEDYHPFNSKEMHSTSSLLPSG 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00514 317 Gene3D - 30 167 IPR008942 -
Vimu4g00514 317 MobiDBLite consensus disorder prediction 244 263 - -
Vimu4g00514 317 ProSiteProfiles ENTH domain profile. 28 151 IPR013809 -
Vimu4g00514 317 SMART enth_2 34 151 IPR013809 -
Vimu4g00514 317 PANTHER EPSIN/ENT-RELATED 13 256 - -
Vimu4g00514 317 Pfam ENTH domain 34 145 IPR013809 -
Vimu4g00514 317 CDD ENTH 36 142 - -
Vimu4g00514 317 SUPERFAMILY ENTH/VHS domain 14 151 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00514 Vimu-Chr4 3728854 3730561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00514 K12471 - gmx:100812797 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00514 4 3728854 3730561 Vimu5g02083 5 32571837 32573258 PCT