Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00482 ATGCCTGAACGTACTTACAAACATATTGATGTTGCAAGAAGTCCTACCAGCATCGCTAGTGTGGAACATTTCCTCCGAAGTGCAGCCGGGGATTCTTCTAGGATGTCACCAACTAGCTCTTCCCCTTCCTCTCCTATGAAGCAACAGGACCTGGAAGATGACCAAGGCCTCTATCAGAAGAAATCAGTCCTCACCAAAGTGAAGCAAAAGGCCAGGAAATTGTGCAACAGCCTCAGCAAGAAAAGAATAGAGGACGACAATGTCACACCCTCTAGTAGAGCTAGGTTTGCAGATGAAGGGGAAGAGGAGGAAGAAATTGAAGAAGAAGAAGAACAAGAACAAGACGCTGAATACCTTGGAGCTCCTATGTATGAATCGGAGCAGGCACCTGAGACATACAAAGAAAATGCAAGGCAACATCCAAGAGCAAATCCAGTAATCTCTGAGAAGCACGTTTTGCACAACGCTGTCAAACTAGGAATGCAGGAAGATCAAAAGCCAAATGCTGCTGTCAATCACAAACTCACTTCAACAACTCAACCTGATACTGCAACAACAGTGGCAGCATCTTCACCCAACGCCTCTAAAACCTTAGCTCAGACAATGACACCTGCCTATGCTGCAGGTTCACCTGCAGCCAATAGCATCCCGTCCCAAAATTCATCCGTTTCATCATCTCGGCTGCAACATTCATTTTCCTCATCTGCTTCACAGAGTAGGAAGAATACAAGCCAAAATGTTCCTTTAGTCAATGATTATTTGAAGAACAAGTCTGAAAAAGAGGATGATGCCAAAATTGAGTCTCCAAAGCAAGATTTGTCATCTTCATCTGCTTCAAAGAGTGGGAAGATTCCTCAAAAGACTTTTTCATTCAAAGATTATGCAAGGAACAGGTCTGAACAAGGGAATGATGCCCCAAATATGACTCCATTGCAAAAATCATCATCCTTCTCAGTTGCTTCATTGAGAGGGAAAAACACAGGCCAAAAGAGTGCTTTGGCCAAAGATTATTCAATGAGCAAGTCAGAGCCAGGGGATGATGAAAAAACTGAATCTCAGCCTCAGGTGACACATGGAGAAAATGGTCCAAGTAATCCAGGCATGATGGACAAGGTGAGAGGAGCTGTAAATTCATTTCTCGGGAATGAGGAGCCATCAGAAGAATATGGAGTCAAAATTCCTACTACACGCACTTCATCACAAACTCAACAAGTTGGTGAGGATGAGAACCGTGGGAGAATTCTACAGGCAAATTAA 1257 0.4368 MPERTYKHIDVARSPTSIASVEHFLRSAAGDSSRMSPTSSSPSSPMKQQDLEDDQGLYQKKSVLTKVKQKARKLCNSLSKKRIEDDNVTPSSRARFADEGEEEEEIEEEEEQEQDAEYLGAPMYESEQAPETYKENARQHPRANPVISEKHVLHNAVKLGMQEDQKPNAAVNHKLTSTTQPDTATTVAASSPNASKTLAQTMTPAYAAGSPAANSIPSQNSSVSSSRLQHSFSSSASQSRKNTSQNVPLVNDYLKNKSEKEDDAKIESPKQDLSSSSASKSGKIPQKTFSFKDYARNRSEQGNDAPNMTPLQKSSSFSVASLRGKNTGQKSALAKDYSMSKSEPGDDEKTESQPQVTHGENGPSNPGMMDKVRGAVNSFLGNEEPSEEYGVKIPTTRTSSQTQQVGEDENRGRILQAN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00482 418 MobiDBLite consensus disorder prediction 270 286 - -
Vimu4g00482 418 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 30 417 IPR037491 GO:0009737
Vimu4g00482 418 MobiDBLite consensus disorder prediction 392 409 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 340 354 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 169 252 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 159 418 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 300 336 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 254 269 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 31 50 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 76 120 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 100 116 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 25 59 - -
Vimu4g00482 418 Coils Coil 97 119 - -
Vimu4g00482 418 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00482 Vimu-Chr4 3496418 3498464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00482 - - vra:106758277 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00482 4 3496418 3498464 Vimu5g02120 5 32799942 32801793 PCT