Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00350 ATGGGAATATTTGCGGTAAATAAGGATGGAGAAGTCACAGTGAGCTTCAAGAACGACATAAATTTGAATGATTTCTTTAAGCCTGATCAGATAGCGGATGCAACTGCTGAAAAATCTACAAGTTTGAAGAGAAGGAAGGTTGGAAATCTGAAGCTCCAAACCGCATTCTCGTTCAAATATATGCTTTCACTAGAGGGTTTGTTCAGCAAACAAAAACCAGAACAAATGTTTTCTCCAGAGCCCGATTCTCAGCTTGAATTAGCAGCAATTAAGCTTCAGAAAGTCTACAAGAGTTACAGGATCAGAAGAATTCTGGCTGATTGTGCAGTTGTTTGCGAGGAGCTGTGGTGGAAGGATTCGGTGATTACTGCTTGCAGGTGTTCTACATCCCATTTTGACCCTGATAAATCAGAAACAACAGCTATTTCAAAATGGGCAAGGGCTAGGATGATGGCTGCTATGGTGGGAAAAGGTTTGTCCAAAGATGATAAGGCACAGAAATTCGCACTAAGACACTGGCTTGAAGCTATTGATCCTCGTCATCGTTATGGTCACAATCTTCATTTCTACTATGAAGTCTGGTTTCGTAGCCTGAGCTATCAGCCTTTTTTCTACTGGTTGGATGTTGGAGACGGCAAAAAAGTGGAGCTAAAAGCATGTCCTAGAAGGGACTTGCAGGACCAGTGCATAAAGTACCTTGGACCTAAAGAAAGGGAAGCATATGAAGTGATTGTAGAGGGAGGGAGGCTTGTTTATAAAGAGAGCAAGAACCTTGTACACACTACCGAGGAATCCAAGTGGATTTTTGTTCTTAGCTTATCTAGAGTTTTGTATGTTGGACGGAAGAATAAAGGCCATTTTCAACACTCTAGTTTTCTGGCTGGTGGTGCAACCATTGCATCTGGAAGATTGGTTGCTCAGCATGGAGTTCTTCAAGCTATATGGCCATACAGTGGTCACTACCGTCCAACAGAGAAAAATTTCATGGAATTCATTAGCTTCTTGGAGGAACACAGTGTGGACATGACAAATGTAAAGAAAGATGCAGTGGACGAAGATGTTCCACCTTCTCAACCTGCCAATGATGAGGAGCTGGCCTTTGAATACATGGATGGCAAAGTGGATGTCAATGCTAATAAAAATGGTAAAGAAAAAGTGGAAGAAGGTTCAGTACATGAGAACAAGCCAATGTCAAGCAAATGGAGTACTGGAGTAGGTCCTCGGATTGGTTGTGTGAGAGAATATCCAACAAAATTCCAAGTTCAGGCACTTGAACAGCTCAATCTCTCACCTAGAGACAACCAGGGAACATTTGCAGACAAAGCACCAATTCCTTCTCCCAGACCAAGAACCAAACATCTGTCACCTAAGCTTGTGAACATGGGACTTCCTAGCCCTATGCTACAAGGACATTGA 1416 0.4244 MGIFAVNKDGEVTVSFKNDINLNDFFKPDQIADATAEKSTSLKRRKVGNLKLQTAFSFKYMLSLEGLFSKQKPEQMFSPEPDSQLELAAIKLQKVYKSYRIRRILADCAVVCEELWWKDSVITACRCSTSHFDPDKSETTAISKWARARMMAAMVGKGLSKDDKAQKFALRHWLEAIDPRHRYGHNLHFYYEVWFRSLSYQPFFYWLDVGDGKKVELKACPRRDLQDQCIKYLGPKEREAYEVIVEGGRLVYKESKNLVHTTEESKWIFVLSLSRVLYVGRKNKGHFQHSSFLAGGATIASGRLVAQHGVLQAIWPYSGHYRPTEKNFMEFISFLEEHSVDMTNVKKDAVDEDVPPSQPANDEELAFEYMDGKVDVNANKNGKEKVEEGSVHENKPMSSKWSTGVGPRIGCVREYPTKFQVQALEQLNLSPRDNQGTFADKAPIPSPRPRTKHLSPKLVNMGLPSPMLQGH 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00350 471 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 43 450 IPR044159 -
Vimu4g00350 471 MobiDBLite consensus disorder prediction 431 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00350 Vimu-Chr4 2503115 2506199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00350 - - gmx:100786055 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00350 4 2503115 2506199 Vimu4g00350 4 2503115 2506199 ECH
Vimu11g02981 11 49458814 49462214 Vimu4g00350 4 2503115 2506199 PCT