Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02981 ATGACAATTTTCCACCCTTTTCCTGTCTTCAACACTCCTGCCTTATATAAGAGAGAACGGAAGTGCGCATTTCTATCACTAACCCCTATAAAACTCAACTCCTATCCATATATCTATCCTTGCAAAAAGGAACCTCACTTCGTGTACTTTAAGCATTTTGAATCAAGGATTGACTTGGTCTACTTGGATTTCCTTTCTTTGGGTAGTGGTAGCGTTGCTCTTGGGCACTACTTATTTGCCAGCTTCAAGGTTGTGCAAATGGTGACAACTGTAAGGCCTCTGGACTATGAGTCAAAGGAGGCCGAGACCACCTTCAGAACAATGAGCTTCAACAAGTGCAGAAACCTTGATGACTTTTATAAGCCTGATGAGTTGGATGAGGTTATTACTGAGAATACAAGCTCAAAGAGAAAGAAGGCAGGGAATCTGAAGCTGCAAACCACATTCTCCTTCAAATATCTACTTTCTGGTAATTCTGATTCAAATGAGGAAGTTGATGGCCTGTTCAATGAACAAGGCCCCCCATTTGTTTTTCCAGAATCAGAAATTTTGTTTTCACCAAAGCCCGTTGGGGAGCTTGATGTTGCTGCAATCAAGCTGCAGAAGGTTTACAAGGGCTACAGAACCAGAAGAAATCTTGCAGATTGTGCAGTTGTCTGTGAGGAGCTATGGTGGAGAGCCTTGGATTTTGCTGCTCTTAGCAGGTGTTCCCCATCAAATTTTGACTCTGGTAAATCAGAATCAGCTAGTTCAAAATGGGCAAGAGCTAGGACCATGGCTGCTAAGGTGGGAAAAGGTTTGTGCAAAGATGATAAGGCGCAGAAATTAGCTCTGAGACACTGGCTTGAAGCTATTGATCCACGTCACCGTTATGGACACAATCTGCACTTATACTATGATGTTTGGTTTCATAGCCAGAGTACACAACCTTTTTTCTACTGGTTGGACGTTGGAGATGGGAAAGAAGTAAATCATAAGGAGTGCGTAAGAAGTGAATTGAATAAGCAATGCATAAAGTATCTTGGACCCAAAGAGAGGGAAGCCTATGAAGTGGTTATTGAGAAAGGAAGGCTAGTTTATAAAAGGAGTCAGAACCTTGTTCACACTGAGGAGGGATCTAAGTGGATTTTTGTTCTCAGCTCTTCAAGAATTTTGTATGTTGGTGAGAAAAAGAAAGGCCAATTTCAGCACTCAAGTTTTTTGGCTGGAGGTGCTACTATTGCTTCTGGAAGATTGGTTGCCCAACATGGAGTTATTGATGCTATATGGCCCTACAGCGGTCATTACTGTCCTACAATGAAGAACTTTATGGAATTCATTGCGTTCTTGATGGAACATGATGTGGACTTGACCAATGTAAAGAAGTATGCAATTGATGATGACATTCCACCTTCAAAACCTGCTGATGAGGAGCTACAGTTTGGATCAAAAATGGCTAGTTCAAGTGGCTTTACCATTGCCAAAAGTGGCAGTGAAGAGAATATAGGTGAATCTGGCAGTACCAATATGCAAACTTCAACAGTTAAAGAGAGGAAACCATTGTCAAGAAAATGGACAACTGGAGCTGGTCCTAGAATTGGATGTGTGAGAGAGTACCCTGCAAAACTCCAAGTTAAGGCACTTGAACAGCTGAATATATCACCTAGAGTCAACCATGGAAAAGTAGCAGCCAAAGCACCCATTCCCTCACCAAGGCCTAGTCCAAAAATCCACCTATCTCCAAGACTTGTGCACATGGGAATTCCTAGTCCATGA 1755 0.4217 MTIFHPFPVFNTPALYKRERKCAFLSLTPIKLNSYPYIYPCKKEPHFVYFKHFESRIDLVYLDFLSLGSGSVALGHYLFASFKVVQMVTTVRPLDYESKEAETTFRTMSFNKCRNLDDFYKPDELDEVITENTSSKRKKAGNLKLQTTFSFKYLLSGNSDSNEEVDGLFNEQGPPFVFPESEILFSPKPVGELDVAAIKLQKVYKGYRTRRNLADCAVVCEELWWRALDFAALSRCSPSNFDSGKSESASSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYDVWFHSQSTQPFFYWLDVGDGKEVNHKECVRSELNKQCIKYLGPKEREAYEVVIEKGRLVYKRSQNLVHTEEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVAQHGVIDAIWPYSGHYCPTMKNFMEFIAFLMEHDVDLTNVKKYAIDDDIPPSKPADEELQFGSKMASSSGFTIAKSGSEENIGESGSTNMQTSTVKERKPLSRKWTTGAGPRIGCVREYPAKLQVKALEQLNISPRVNHGKVAAKAPIPSPRPSPKIHLSPRLVHMGIPSP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02981 584 MobiDBLite consensus disorder prediction 489 519 - -
Vimu11g02981 584 MobiDBLite consensus disorder prediction 489 509 - -
Vimu11g02981 584 ProSiteProfiles IQ motif profile. 193 222 IPR000048 GO:0005515
Vimu11g02981 584 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 132 570 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02981 Vimu-Chr11 49458814 49462214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02981 - - vra:106773785 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02981 11 49458814 49462214 Vimu4g00350 4 2503115 2506199 PCT