Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00314 ATGACTAACTACGGCACAATCCCAACTTCCTCGTCACCTTCCACCAACCTCGATTTCATCTCACGCGCCAAGCAGCGGGTCAAGGAGGGTCTAGCCACGCGCCGTCCATGGAAGATCATGTTCAACTTCCGCTCCTTCTCCCTTCCGGCTGGTTTCTCCGACGCCGTGAGGCGCGTGCGGGAGAACGTCGGCTACTTCCAGATGAACTACGCCATCGTGGTGCTAATCGTGCTCTTCCTCAGTCTCCTCTGGCATCCAATATCGCTGATCGTGTTCGTGGTGCTCGTGGCGGCGTGGCTCTTCCTTTACTTCCTCCGCGACGAGCCGCTCGTCGTGCTCGGCCGGATGATCAGCGACCGCGTCGTGCTCGTCGTCATGGCGGTGCTGACCATCGCCCTCCTCCTCCTCACCGGCGCCGTCTCCAACATCCTGGTGGCACTCCTCATCGGAGTGGTCTTGGTGGTGGCGCACGCCGCCTTCAGAAGAACCGATGATTTGTTCTACGACGAAGAAGAGGCCACTGCTCGCTTCGTTCCTCCTCCTCCGCATCCTCATCCCGGTGCTCCTCTTTCTTGA 576 0.5972 MTNYGTIPTSSSPSTNLDFISRAKQRVKEGLATRRPWKIMFNFRSFSLPAGFSDAVRRVRENVGYFQMNYAIVVLIVLFLSLLWHPISLIVFVVLVAAWLFLYFLRDEPLVVLGRMISDRVVLVVMAVLTIALLLLTGAVSNILVALLIGVVLVVAHAAFRRTDDLFYDEEEATARFVPPPPHPHPGAPLS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00314 191 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 172 IPR004895 -
Vimu4g00314 191 Pfam PRA1 family protein 31 171 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00314 Vimu-Chr4 2311341 2311916 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00314 K20359 - gmx:100788152 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00314 4 2311341 2311916 Vimu4g00314 4 2311341 2311916 ECH
Vimu4g00314 4 2311341 2311916 Vimu11g02948 11 49223975 49228358 PCT