Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00290 ATGATGATCGGACAGGAAAAGGGTGTGAAGCCTGTTCTGCTTAAATTTGGTTTGGCTTTGGCTCTTTCGTTTGCTGGATTTCTCTACTCACGCTTCAGAATCAGAAGAATCAAGCCCTCCAAGTCACGCAAGAGGGGTTCTTTCGGTCACGAGAGTGAAGTTAATTCAGGAGGAGGTATAGGGGCAGCAATAAGCACTTGCAACACCATGTCAGCAGGAAATTTTCTATGTTCTGAAGAAACTTGCACCGACAGGGTGATAACTGGAAATTCTCCTCTTGCTCTCTCTCCTGACAGTACACAAAATGGTGATAGTGATGGGTTCCTCCTACCTGAATTTAATGATCTTCTTAAGGTCATAGACTTTGGAGCCACAGTTGTTAGAAATTCTTCTAAAATAAATATGGAAGCACCATGGTTAAAAGAATATGCAGATCCTGAGAAGGATGACTACGAGCAAGAGGTAACAGAACTCCGGAACATGATTAGAATGCTTCAAGACAGGGAACACAGTCTTGAGGTTCAACTGCTCGAGTACTGCGGTCTTAGAGAGCAAGAAACAGCAGTGATGGAGCTGCAAAATAGATTGAAAGCAAGTACTGTGGAGGTAAAGATGTTCAATCTGAAGGTTAAGACCTTACAGTCTGAGAATTTGAGACTAAAGGAGCAGGTCTCGGATCATGCAAAAGTGCTGGCTGAACTTGAGAGTGCAAAAGCGCAAGTCAAATTGCTTAATGAGAAAATTAGGTATGAAGCTGAACAGAACAGGGAGCAGATCGTAAGTCTTCAACAAAAAGTTTCCAGGTTGCAAGACCAACAATGCAAAGATGCTGCTTGTGATCAGGACATTCAAATTAAGCTGCAAAAGCTACAGGAGCTTGAGTCTGAAGCAGATGAGTTGAGGAAGTCTAATTTAAGATTGCAGATAGAAAATTCTCACTTAGTTCGAAGATTAGATTCTACCCAAATCCTTGCTAATGCAGTTCTGGAAGACCCAGAGGTAGATGCTGTGAAGCAAGAAAGTGAGTGTCTTAAACAAGAAAATGCACGCTTGACGAAGGAAATTGAGCAACTATATGCTGATCGATGTTCAGATCTTGAAGAATTAGTATATATGCGGTGGATAAATGCTTGCTTACGATATGAACTAAGAAACTATGAAGCCCCACCAGGTAAAACGGTTGCAAAGGACTTAAGCAGAAGCTTGAGCCCCACGTCTGAGAGGAAAGCCAAGCAGCTTATACTTGAATATGCAAATGCTGATGGACCAGGGAACATTGTGGACTTTGATATAGATCAATGGTCCTCCTCGCAGGCTTCTTCTCTCACTGACATTGGAGAGTGTGATGATTTTTCTTCTGTAGATAATTCATCTGCTGCTAAAACTAACACCACAAGCCAGACCAAGCTTTTAAGCAAGCTTAGACAACTGATACAAGGTAAAGACAGTAGTCATCACCATAGTCATGTTTCATCACAAGAAAAATTCAGACGTCAAAATAGCAATCCTCAACGGCAAAGTACTTCAACTGGAATTGAGGGTCTTAGGAGTGAGTTTGCAACTCCCATTGTCACATCCAGAACTTCCCTTGATTTCTCTAGGTTGACGTGTACTCAGGAAGAAGTAAATAGGAGAAATTCAGATAGCGCTTTCATGGAAAGCTCAAAGAAATTTAGTGCACGTACAAGTGGTTCCTTCTCAGATTCCTTGGGCTTGGAAAAAAATAATTTGGAGAAATACGCAGAAGCTTTAAAAGATTCTAGCGTGAGTGCTAGACAACAAAGACGTAGTAGATCAGCATCATGTAGTTAG 1812 0.415 MMIGQEKGVKPVLLKFGLALALSFAGFLYSRFRIRRIKPSKSRKRGSFGHESEVNSGGGIGAAISTCNTMSAGNFLCSEETCTDRVITGNSPLALSPDSTQNGDSDGFLLPEFNDLLKVIDFGATVVRNSSKINMEAPWLKEYADPEKDDYEQEVTELRNMIRMLQDREHSLEVQLLEYCGLREQETAVMELQNRLKASTVEVKMFNLKVKTLQSENLRLKEQVSDHAKVLAELESAKAQVKLLNEKIRYEAEQNREQIVSLQQKVSRLQDQQCKDAACDQDIQIKLQKLQELESEADELRKSNLRLQIENSHLVRRLDSTQILANAVLEDPEVDAVKQESECLKQENARLTKEIEQLYADRCSDLEELVYMRWINACLRYELRNYEAPPGKTVAKDLSRSLSPTSERKAKQLILEYANADGPGNIVDFDIDQWSSSQASSLTDIGECDDFSSVDNSSAAKTNTTSQTKLLSKLRQLIQGKDSSHHHSHVSSQEKFRRQNSNPQRQSTSTGIEGLRSEFATPIVTSRTSLDFSRLTCTQEEVNRRNSDSAFMESSKKFSARTSGSFSDSLGLEKNNLEKYAEALKDSSVSARQQRRSRSASCS 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00290 603 MobiDBLite consensus disorder prediction 478 518 - -
Vimu4g00290 603 MobiDBLite consensus disorder prediction 543 571 - -
Vimu4g00290 603 MobiDBLite consensus disorder prediction 552 571 - -
Vimu4g00290 603 Coils Coil 227 272 - -
Vimu4g00290 603 MobiDBLite consensus disorder prediction 495 518 - -
Vimu4g00290 603 MobiDBLite consensus disorder prediction 584 603 - -
Vimu4g00290 603 Coils Coil 148 175 - -
Vimu4g00290 603 MobiDBLite consensus disorder prediction 587 603 - -
Vimu4g00290 603 Coils Coil 334 361 - -
Vimu4g00290 603 Coils Coil 182 223 - -
Vimu4g00290 603 MobiDBLite consensus disorder prediction 479 494 - -
Vimu4g00290 603 Coils Coil 283 310 - -
Vimu4g00290 603 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 10 519 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00290 Vimu-Chr4 2021196 2023784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00290 - - gmx:100796238 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00290 4 2021196 2023784 Vimu4g00290 4 2021196 2023784 ECH
Vimu4g00290 4 2021196 2023784 Vimu11g02905 11 48896793 48902120 PCT