Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02905 ATGGAAAGAATAATTAGGTTTTTTGGTTTGATAACGAAAGAGGAAAAGGGTATGAAGCCTTTTCTTCTGAAATGTGGTTTGGCTTTGGCTCTTACCTTTGCTGGACTTCTCTACTCTCATATCGGAGCCAAGAGAATCAAACCTTCTCCTACTTCCCCCAAGGGGCAACCTTCAGAGGTAAAAGGTAAAAGGGCTGCTTCTAGTTCAGAGGAAAATGTTTTGGATGCTGTAAGTGACATGAAAAAGACTATCTGTCCTGAATTTAATGATCCTATCAAGGATGCTGAATTTGGAGTCATCATTGAAGGTAGTTCTTTTAAGAAAGAGGTAGAAACACCAAGGTCAAAAGTAGGATCTCCTATGGCATATGCAAATGTTGACAAAGATGACCATGAGAAAGAGATCAGGAACCTCAGGAGCATGATCAGAATGCTTCAAGAGAGGGAAAGAAACCTTCAGTTTCAACTGCTTGAGTACTGTGGCATTAAAGAGCAACAAGCAGCAGTGATGGAGCTCCAAAATAGATTAAAGATAAGTAATATGGAGGCTAAGATGTTCAATCTGAAGGTTGCGACCTTGCAGTCTGAGAATCGGAGATTGGAGGTACAAGTGGCTGATCATGCAAAACTGGTATCTGAGCTTGAGACTGCAAAAACGAAAGTGAAGTTTTTGAAGAAGAAAATTAAGTATGAAGCTGAACAGAATAGGGAGCATATCATGAATCTTAAGCAAAAAGTTTCCAAGTTGCAGGATCATGAATTTAAAGTTGCTGCTAACGAACAAGAGATTCAAATTAAGCTGAAAAGGCTCAAGGATCTTGAGTGTGAGATAGAGCAGTTGAGAAAATCTAATTTGAGACTCCAGATAGAAAATTCTGACTTATCTCGAAGATTGGATTCTACTCAGCTCCTTGCAAATGCTGTTCTAGAAGATCCTGAGACACAAGCTCTGAAGGAAGAAGGTGAACGTCTCAGACAAGAGAATGAAGGGTTGACAAAAGAACTTGAGCAATTACATGCAGATAGATGTTCAGATCTTGAAGAGTTAGTTTATTTGAGGTGGATAAATGCTTGCTTAAGACATGAACTACGAAGTTATCAGCCCCCACCTGGTAAAACAGCAGCAAGGGACTTAAGTAAAAGCTTGAGTCCTACCTCTGAGAAGAAAGCCAAGCAACTTATACTTGAATATGCAAACAATGATGGGCGAGGGAGCGTTTCTGATGTGGAATCTGACCAATGGTCCTCTTCACAGGCTTCTTGTTTCGCAGACTCAGGTGAGCATGATGATTATTCTCTTAATGATACTTCATCTGAGGCCAAAGCTAACAATCCAAGCAAGTCAAAGATTTTTGGCAAGCTTATGAAGCTGATACGAGGCAAAGACAGCCAGAACCAACGTGATCGAGTTATATCTAAAGAAAAATCAATTTCCCGGGTAGATAGCAGTTCACATTTCAGCTTGAGTATGTCAACTGGAAATGAGTGTCTTAGGAGCGAATATACAACTCCCTCTTTCACTTCTAGAACCTCCTTTGATTATAACCAAGCCACGAGTATGAAGGATGATAGTAGGAGAAATTCATATAGCCATACCCCAGGAAGCTCCAAGAATCTCAGTCCAACGAGAAGAAGTTCAGCAGATTCCAAAAACCGCCTCGATTCTTTCTCAGAATCCCCTGACATGGAGAAAACTAATTTGGTCAAATATGCTGAAGCTTTAAAAAATTCCAGTGAAGCCCCCAAACATAAATCACACAGAAGATCAGCAGCATATAGTTCATTTTAA 1788 0.401 MERIIRFFGLITKEEKGMKPFLLKCGLALALTFAGLLYSHIGAKRIKPSPTSPKGQPSEVKGKRAASSSEENVLDAVSDMKKTICPEFNDPIKDAEFGVIIEGSSFKKEVETPRSKVGSPMAYANVDKDDHEKEIRNLRSMIRMLQERERNLQFQLLEYCGIKEQQAAVMELQNRLKISNMEAKMFNLKVATLQSENRRLEVQVADHAKLVSELETAKTKVKFLKKKIKYEAEQNREHIMNLKQKVSKLQDHEFKVAANEQEIQIKLKRLKDLECEIEQLRKSNLRLQIENSDLSRRLDSTQLLANAVLEDPETQALKEEGERLRQENEGLTKELEQLHADRCSDLEELVYLRWINACLRHELRSYQPPPGKTAARDLSKSLSPTSEKKAKQLILEYANNDGRGSVSDVESDQWSSSQASCFADSGEHDDYSLNDTSSEAKANNPSKSKIFGKLMKLIRGKDSQNQRDRVISKEKSISRVDSSSHFSLSMSTGNECLRSEYTTPSFTSRTSFDYNQATSMKDDSRRNSYSHTPGSSKNLSPTRRSSADSKNRLDSFSESPDMEKTNLVKYAEALKNSSEAPKHKSHRRSAAYSSF 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02905 595 MobiDBLite consensus disorder prediction 46 73 - -
Vimu11g02905 595 Coils Coil 232 252 - -
Vimu11g02905 595 Coils Coil 256 297 - -
Vimu11g02905 595 Coils Coil 128 155 - -
Vimu11g02905 595 MobiDBLite consensus disorder prediction 517 546 - -
Vimu11g02905 595 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 19 478 IPR040265 -
Vimu11g02905 595 MobiDBLite consensus disorder prediction 517 595 - -
Vimu11g02905 595 Coils Coil 162 227 - -
Vimu11g02905 595 MobiDBLite consensus disorder prediction 365 387 - -
Vimu11g02905 595 MobiDBLite consensus disorder prediction 460 480 - -
Vimu11g02905 595 MobiDBLite consensus disorder prediction 457 490 - -
Vimu11g02905 595 Coils Coil 314 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02905 Vimu-Chr11 48896793 48902120 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02905 - - gmx:100781632 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02905 11 48896793 48902120 Vimu11g02905 11 48896793 48902120 ECH
Vimu4g00290 4 2021196 2023784 Vimu11g02905 11 48896793 48902120 PCT