Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00288 ATGACCAGGCTCATTAGAACCATCCTCGTCGCTCACAAGCTTCAGCTTCACTACCCCAAATGCATTTTCCGACCTCTCCTTTCCCACTACTCTGCAACAGCGGATTCTTCCGATGCTGACCTCACACACAAACCAACTAATGAAACCACCACCACCGGTTGGAGCAGGTATGGGAACATCTACGCCCACCCAGTTGTGCAGCCAAGCGATCACAGCGATGGAGATGAACACCCTAGCGGTTTGAGGGGAAATGATGCACCGATGGTGAAGAAAAAGGGGAAGGTGAAAGCTCAGTGGGTGTGCTCTGATTGTGGGCACACGACGGGGAGATGGTGGGGGACATGCCCCGAGTGCGATTTAACTGGCACAATGCAAGAGTTTAACGAGAGCAAATTAACTGACAAATCCAGAGGGGGGTTAGCCATTACCGACGACGCAGTGCGCTCGTGGCTCCCACGACGACCTGAAGAGCTGCGCCTCGTCAAATTGGAAGAGCTTGTTTTGGATCATGTGGTGATTGCTGAGGATGATTTCCTCGATGGGGAATTTGCCCTTCTAGACTTTTACAAGAGATGTGCCGTGTTTGGATTCCTATTAAGGGCAAGAGAAAGATCTCTTGACTTACGACTCTTGAACTTTAAGGTGGGCGGGAAGGAGATATTCACTTACTTAGAGCCTGTTGGAGCCTTCGGAACCTTTACGTCTATAGGGGCTCCACAGGAGGGAAAAGAGAGATAA 738 0.5054 MTRLIRTILVAHKLQLHYPKCIFRPLLSHYSATADSSDADLTHKPTNETTTTGWSRYGNIYAHPVVQPSDHSDGDEHPSGLRGNDAPMVKKKGKVKAQWVCSDCGHTTGRWWGTCPECDLTGTMQEFNESKLTDKSRGGLAITDDAVRSWLPRRPEELRLVKLEELVLDHVVIAEDDFLDGEFALLDFYKRCAVFGFLLRARERSLDLRLLNFKVGGKEIFTYLEPVGAFGTFTSIGAPQEGKER 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00288 245 MobiDBLite consensus disorder prediction 65 88 - -
Vimu4g00288 245 Pfam Rubredoxin metal binding domain 99 126 IPR041166 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00288 Vimu-Chr4 1999524 2000941 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00288 K04485 - vum:124830952 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00288 4 1999524 2000941 Vimu4g00288 4 1999524 2000941 ECH
Vimu4g00288 4 1999524 2000941 Vimu11g02903 11 48879482 48896921 PCT