Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00270 ATGGATTTCCGTGCCCCGCCGCCATCTCCAGTGGCCGCTGCCAGGCGAACGTCCTCGCTCTCCAACGACGACGTTTTCCGCCGATTCTTGGAGACCTCTCTCCGTCTCCCCAACATTAACAACAACCACCAAAAGCCGCTTCCAAAGGTTGACTTTCCCTCCTTAGGTTCCGACGATGCTCTTCGTCACGTCATTTCGGACTCTTTCGCAACTGTCGGATGCTTTCAGCTGCTCAACCATGGGATTCCACTGGACGTGATCTCGTCGCCGGCGGAAGCTTCCATCGCAATTTTCAAGGTGCCGCCGGAGAAGCGAGGCGGCTTGACGAGGTCAGCAGAGAGCCCCTGGGGTTTCGAGGAAGATGACGAGTTCGTCTGGGGAAGAGACAAGGAGTTCAACCTCAGAATGCAGCAACTTCCGGCAGTCGGATATTCCAATTTCAAGTAA 447 0.5548 MDFRAPPPSPVAAARRTSSLSNDDVFRRFLETSLRLPNINNNHQKPLPKVDFPSLGSDDALRHVISDSFATVGCFQLLNHGIPLDVISSPAEASIAIFKVPPEKRGGLTRSAESPWGFEEDDEFVWGRDKEFNLRMQQLPAVGYSNFK 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00270 148 SUPERFAMILY Clavaminate synthase-like 24 118 - -
Vimu4g00270 148 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 2 148 - -
Vimu4g00270 148 Pfam non-haem dioxygenase in morphine synthesis N-terminal 47 111 IPR026992 -
Vimu4g00270 148 Gene3D - 15 139 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00270 Vimu-Chr4 1842504 1842950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00270 - - pvu:PHAVU_005G166600g 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00270 4 1842504 1842950 Vimu4g00270 4 1842504 1842950 ECH
Vimu4g00270 4 1842504 1842950 Vimu11g02885 11 48711918 48712472 PCT