Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02885 ATGCTGTCGCCGTTTTCGCCCATGCCGGAAATCCCCGTCGATTTCCGCGCGCCGCCGCCCTCTCCGGTGGCATCCGGCCGGAGATCCACCGTCACCAACGACGACGTTTTGACCGAGTTTCTAGAGGCCTCGCTTCGCGTTCCCGATCTGGTCCTGCCGGACAAGATCTTCCCCAAACAGAAGCACCTCGACGCGCCTCCCGAGGTAGACTTCGTGTCGCTCTGCTTCCACCGTGACGACGCTCTCCGCAACGTCGTGTCCGATTCCCTTGCCAGGATCGGGTGCTTCCAGCTGCTAAACCACGGGATTCCGTCACAGCTGGTGGACTCCGCCGCCGAGGACGCCGCCGGAGTGTTCCAGGTGCCGCATGCAAAGCGTGCAGCAGCGACTAGGTCACCGGAGAAGCCCTGGGGGTTCGAAGAGTATCACGCCGGAGAGGAGGAAGAAGAAGGTAGTGAAGAATTTGTGTGGTGCAATGAGGATGAGTTGAAGTCGAAAATGGAGGGAATTTGGCCCATTGGATATCCAAATTTCAGGTTACACCATAAATTATAA 555 0.582 MLSPFSPMPEIPVDFRAPPPSPVASGRRSTVTNDDVLTEFLEASLRVPDLVLPDKIFPKQKHLDAPPEVDFVSLCFHRDDALRNVVSDSLARIGCFQLLNHGIPSQLVDSAAEDAAGVFQVPHAKRAAATRSPEKPWGFEEYHAGEEEEEGSEEFVWCNEDELKSKMEGIWPIGYPNFRLHHKL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02885 184 Gene3D - 40 183 IPR027443 -
Vimu11g02885 184 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 7 179 - -
Vimu11g02885 184 Pfam non-haem dioxygenase in morphine synthesis N-terminal 78 153 IPR026992 -
Vimu11g02885 184 SUPERFAMILY Clavaminate synthase-like 56 179 - -
Vimu11g02885 184 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02885 Vimu-Chr11 48711918 48712472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02885 - - gmx:100786234 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02885 11 48711918 48712472 Vimu11g02885 11 48711918 48712472 ECH
Vimu4g00270 4 1842504 1842950 Vimu11g02885 11 48711918 48712472 PCT