Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00207 ATGGGTTGGTGCGGGTGGGGTACAATGCGGTTTGGTTTTGCTTGGTTATGTTCGGTTCGGGTTCGGTTCGATTGGGTTGGGTTTGGTCGAGTTGGGTCACTTCGGGTCATGTCAGTTCGGTCATCTCAACTTGGTTCAATTTGGTTGGGAGGCGTTCGGTGCGGTTCGGTGTGGCGGTTCGGATCGGATGGGATCGGGTCGATTCGGTTCGGTCGTTGGATTGATCCAACAGTCAGAATCTCAGGACGAGGCTACCGACGGTGCAGTGCAGTGGCTGGGATTGAAATTGGGAATGATGGCACGTGCAGGACGCACAGGACGCACGTGTTCAGGAAGCTAATGGAGGAAAGCAGCAATAGAGGGGAATTTCAGCCTACTTTGGCTAAGCAGACTTCATTGAGGTTAGGTGGCAGTTTTAAATCAACGTTATCTGGAAGATCAAGTCCGCGAAATTCGCCGTCATTTCGGAGACTGAATTCTGGACGCACACCAAGAAGAGAAGGAAGGAACAGTGTAGGCGGGGCACTGTGGTTTCGGAGCAATCGTTTACTTTTTTGGTTGCTTCTAATTACCCTCTGGGCTTATCTTGGATTTTTCGTTCAGTCATGGTGGGCTCATAGTGATAAGAAGGAGGAATTTTCTGGCTTTGGAACGGGGCCGCGAAATACTGGCTCTGACGCGGAACAGGTTCAGCGCCGTGATTTGCTTGCTAGTGATAATTCATTGTCTGCTAATAATGAGACTGATGCAAATATAGCAGGGACTAGTAAAACTATAAATGTAGCTTTGGCCAAGAAAGGCAATGATGTTCCGTTACATCGTAAAACGAGCTCAAAGAAGAGGAGCAGGAGAAGGCGTGCTTTGAAAGGTAAATCAAGTGGTAAGCTGAAATCAACTACAGAAATTAAGAACGCTGATACAGAGGAGCAGGAGCCAGAAATTCCTACAGCCAATAGTACGTATGGATTGCTTGTTGGTCCGTTTGGCTCAGTGGAGGATAGGATTCTGGAATGGAGTCCAGAGAAACGTTCTGGGACATGTAACAGGAAGGAGGATTTTGCACGTCTGGTTTGGTCCCGAAGATTTATCTTGATATTTCATGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGGAACAGAACTTTTGAGCTGTGGGGCTACGGTTTCAGCTGTTGTGCTTAGCAAGAAAGGTGGTTTGATGTCAGAGCTTACTAGGAGACGGATCAAGGTGGTTGAGGACAAAGCTGATCTCAGCTTCAAAACTGCAATGAAGGCCGATCTTGTCATTGCTGGTTCAGCTGTCTGTGCATCATGGATTGAGCAATATATCGAACATTTCCCTGCTGGTGCAAGCCAAGTTGCCTGGTGGATTATGGAAAATCGTCGAGAGTACTTTGACCGTTCCAAAGATGTGTTGGGCAGAGTAAAGATGTTGGTTTTTCTTTCTGAATCACAATCTAAACAGTGGCAAAAGTGGTGTGAAGAGGAAAGGATAAAACTTAGATCCTACCCTGAAATTGTTCCATTGTCTGTTAATGATGAATTGGCGTTTGTAGCTGGTATTCCTTCAACACTTAACACTCCATCCTTTAGTACTGAGAAAATGGTGGAGAAAAGGCAGTTATTGCGAGAATCAGTCCGAAAAGAAATTGGCCTAACGGATAATGACATGCTTGTGATATCACTTAGTAGCATCAACCCTGGGAAGGGTCAGCTATTGCTTCTTGAATCAGTAAGCTCGGTACTTGAACAAGGATTATTGCAAGATGATAAGAAAATGAAAAAGGTGTCAACTATGAAGGAAGGCATATCTACCCTGGCTAGAAAGCATCGCAATAGAAAATTGTTGCCAGTGTTGAAGAATGGCAAAGTAGCTTCGAATGATATCTTAAGCAGGAGGAAACAAGTTTTGCCTAATGACAAAGGAACAATTCAACAATCTCTCAAGCTTCTTATTGGTTCTGTTGGATCAAAGAGTAACAAGGCGGATTATGTTAAAAGCCTTCTAAATTTCGTAGAACAGCATCCAAACACCTCAAAATCAATTTTTTGGACTCCGGCCACGACTCGGGTTGCCTCACTTTACTCTGCTGCTGATGTTTATGTTATAAACTCTCAGGGGCTGGGAGAAACATTTGGACGTGTGACTATAGAAGCAATGGCGTTTGGTCTTCCGGTTCTTGGAACGGAAGCTGGGGGAACGCAGGAGATTGTTGAGCACAATGTTACAGGTCTTCTTCATCCTGTTGGACATCCAGGGAATCTTGTTCTCGCACAGAATCTCCGGTTTTTACTCAAAAACCAGTCTGCAAGGAAGCAAATGGGTGTGGAAGGAAGAAAGAAAGTGCAGCGAATGTATTTGAAGCAACACATGTATAAGAAATTTGTAGAGGTTATTGTTAGGTGCATGAGAAGCAAATAA 2433 0.448 MGWCGWGTMRFGFAWLCSVRVRFDWVGFGRVGSLRVMSVRSSQLGSIWLGGVRCGSVWRFGSDGIGSIRFGRWIDPTVRISGRGYRRCSAVAGIEIGNDGTCRTHRTHVFRKLMEESSNRGEFQPTLAKQTSLRLGGSFKSTLSGRSSPRNSPSFRRLNSGRTPRREGRNSVGGALWFRSNRLLFWLLLITLWAYLGFFVQSWWAHSDKKEEFSGFGTGPRNTGSDAEQVQRRDLLASDNSLSANNETDANIAGTSKTINVALAKKGNDVPLHRKTSSKKRSRRRRALKGKSSGKLKSTTEIKNADTEEQEPEIPTANSTYGLLVGPFGSVEDRILEWSPEKRSGTCNRKEDFARLVWSRRFILIFHELSMTGAPLSMMELGTELLSCGATVSAVVLSKKGGLMSELTRRRIKVVEDKADLSFKTAMKADLVIAGSAVCASWIEQYIEHFPAGASQVAWWIMENRREYFDRSKDVLGRVKMLVFLSESQSKQWQKWCEEERIKLRSYPEIVPLSVNDELAFVAGIPSTLNTPSFSTEKMVEKRQLLRESVRKEIGLTDNDMLVISLSSINPGKGQLLLLESVSSVLEQGLLQDDKKMKKVSTMKEGISTLARKHRNRKLLPVLKNGKVASNDILSRRKQVLPNDKGTIQQSLKLLIGSVGSKSNKADYVKSLLNFVEQHPNTSKSIFWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTEAGGTQEIVEHNVTGLLHPVGHPGNLVLAQNLRFLLKNQSARKQMGVEGRKKVQRMYLKQHMYKKFVEVIVRCMRSK 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00207 810 MobiDBLite consensus disorder prediction 276 292 - -
Vimu4g00207 810 MobiDBLite consensus disorder prediction 137 159 - -
Vimu4g00207 810 Gene3D Glycogen Phosphorylase B; 534 790 - -
Vimu4g00207 810 MobiDBLite consensus disorder prediction 137 171 - -
Vimu4g00207 810 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 372 803 - -
Vimu4g00207 810 CDD GT4_PimA-like 363 803 - -
Vimu4g00207 810 Pfam Glycosyl transferases group 1 660 784 IPR001296 GO:0016757
Vimu4g00207 810 Pfam Glycosyl-transferase family 4 358 527 IPR041693 -
Vimu4g00207 810 PANTHER BNAA05G14870D PROTEIN 114 810 - -
Vimu4g00207 810 MobiDBLite consensus disorder prediction 270 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00207 Vimu-Chr4 1439341 1444001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00207 137 808 Glycosyltransferase AT3G15940 62.190 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00207 - - gmx:100793827 1193.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00207 4 1439341 1444001 Vimu4g00207 4 1439341 1444001 ECH
Vimu4g00207 4 1439341 1444001 Vimu11g02820 11 48294273 48297599 PCT