Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00183 AGCAGAATCACTCGAGGTACTTTTGAGTTTGGAAAGACATATGTTGTGAGACCCAAAGGAAAACACCAAGCCACGATAATTTGGTTGCATGGTCTTGGTGACAATGGTTTGAGCTCATCTCAGCTTTTGGAATCCCTTCCACTTCCAAATATAAAATGGATTTGTCCAACTGCCCCCACCCGCCCTGTGGCAATACTTGGTGGTTTTCCCTGCACAGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGCCCAGATGATTGGGAGGGTTTGGATGCCTCAGCAATACACATTGCTAACTTGTTGTCAACAGAGCCAGCTGATGTGAAAGTTGCCATTGGAGGCTTCAGCATGGGTGCAGCAATAGCCCTATACTCTGCAACTTGTTTTGCCATAGGAAGGTATGGAAATGGCATTCCCTACCCTGTCAATCTAAGTACAGTGGTTGGACTAAGTGGTTGGCTTCCAGGATCAAGGAGCTTAAGGAACAAGATAGAAGTATCACATGAAGCAAGAAGACGAGCAACTTCATTACCCATTTTGTTGTGCCATGGAATCAGTGATGATGTGATCCTTTACAAATATGGTGAAAAATCAGCTCAATCCTTATGCTCAGCAGGGTTTCGATATGTTGCATTCAAATCCTATGATGGGCTTGGTCATTACACAATTCCTAGAGAGATGGACGAAGTTTGCACTTGGCTTAGTTCAAAGTTGGGGCTTGAAGGATCCTTGTAA 738 0.4431 SRITRGTFEFGKTYVVRPKGKHQATIIWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEDGPDDWEGLDASAIHIANLLSTEPADVKVAIGGFSMGAAIALYSATCFAIGRYGNGIPYPVNLSTVVGLSGWLPGSRSLRNKIEVSHEARRRATSLPILLCHGISDDVILYKYGEKSAQSLCSAGFRYVAFKSYDGLGHYTIPREMDEVCTWLSSKLGLEGSL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00183 245 Gene3D alpha/beta hydrolase 4 240 IPR029058 -
Vimu4g00183 245 Pfam Phospholipase/Carboxylesterase 14 236 IPR003140 GO:0016787
Vimu4g00183 245 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 244 - -
Vimu4g00183 245 SUPERFAMILY alpha/beta-Hydrolases 14 239 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00183 Vimu-Chr4 1196138 1198240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00183 1 244 Acyl Lipid Metabolism Gene Families AT3G15650 77.049 1.61e-129 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00183 K06130 - gmx:100781212 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02801 11 48116078 48118862 Vimu4g00183 4 1196138 1198240 ECH
Vimu4g00183 4 1196138 1198240 Vimu4g00183 4 1196138 1198240 ECH
Vimu4g00183 4 1196138 1198240 Vimu11g02801 11 48116078 48118862 PCT