Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02801 ATGGGAGAACTTTCAGAAGACGGTCCAGATGATTGGGAGAGTTTAGATGCCTCAGCAGCACACATTGCCAACTTGTTATTAACAGAGCCAGCTGATGTGAAAGTTGGAATTGGAGGCTTCAGTATGGGTGCTGCAGTAGCTCAATACTCTGCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCCCGTATCCAGTGAACTTAAGAGCAGTTGTTGGACTAAGTGGCTGGCTTCCAGGATCAATGAGCTTAAGGAACAAAATCGAAGTGTCACATGAAGCTAGAAGGAGAGCTGCTTCATTACCTCTTTTGCTGGGCCATGGAATCTGTGATGATGTAGTCCTCTACAAATACGGAGAGAAATCAGCTCAATCCTTAAGTTCAGCAGGCTTTCGATACATTACATTCAAATCCTATGATGGGCTTGGTCACTATACTGTTCCAAGGGAGATGGATGAGGTCTCCAATTGGCTTAACTCAAGGCTGGGGCTTGGGGGATCATCATGA 510 0.4549 MGELSEDGPDDWESLDASAAHIANLLLTEPADVKVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSMSLRNKIEVSHEARRRAASLPLLLGHGICDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMDEVSNWLNSRLGLGGSS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02801 169 SUPERFAMILY alpha/beta-Hydrolases 5 163 IPR029058 -
Vimu11g02801 169 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 168 - -
Vimu11g02801 169 Pfam Phospholipase/Carboxylesterase 34 160 IPR003140 GO:0016787
Vimu11g02801 169 Gene3D alpha/beta hydrolase 1 164 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02801 Vimu-Chr11 48116078 48118862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02801 1 168 Acyl Lipid Metabolism Gene Families AT3G15650 71.429 1.30e-81 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02801 K06130 - gmx:100782153 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02801 11 48116078 48118862 Vimu4g00183 4 1196138 1198240 ECH
Vimu11g02801 11 48116078 48118862 Vimu11g02801 11 48116078 48118862 ECH
Vimu4g00183 4 1196138 1198240 Vimu11g02801 11 48116078 48118862 PCT