Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00099 ATGGACTGGTTTTCGTGGCTTTCCAAAACTGGGCTTGAGCCATCTCTGGTGTACGAGTATGGCCTTACTTTTGCTCACAACGAGCTTGAAGAAGATGACATGTTTTACTTCAACCATGAGTTTCTCCAAAGCATGGGTATCTCCATAGCAAAGCACAGACTAGAGATCCTGAAGCACGCTAGAAAAGAGAAGGGAAAGAGCCCACGCGCGGTGGCAAAGCTCGTGGTGGCAATCAAGCGGACAAAGAGGAACTTGGCTAACTATGTGAGGACGCTGATGCACAAAGAAGAATCATCATCAGCACTTGTTGTGGTGCCACCACCAAGGTCTAGTAATGGTTTAGGGACACGGTGGAAGATTGCTACGATGAAGAGGAGAAAAAAGTTGGTGGTGGCCAAGCAAGAGCCACTCTTTCTAACAAATGGAAGTCCCACAGTGGTTCCAGCTCATCCTGTTCTTGATGGTTTTTCCAGTCCTGTGGTGTATCATTTCCAGAAGGATAAGATGGATGGTGATGATGATGGAGATGGGTACTGGTCTGCTGCTGTTGAAGAGATCAAGTGGGATACCATGTTTCAGGATCTAAAGCCTAACTGA 597 0.469 MDWFSWLSKTGLEPSLVYEYGLTFAHNELEEDDMFYFNHEFLQSMGISIAKHRLEILKHARKEKGKSPRAVAKLVVAIKRTKRNLANYVRTLMHKEESSSALVVVPPPRSSNGLGTRWKIATMKRRKKLVVAKQEPLFLTNGSPTVVPAHPVLDGFSSPVVYHFQKDKMDGDDDGDGYWSAAVEEIKWDTMFQDLKPN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00099 198 PANTHER OSJNBA0033G05.11 PROTEIN 1 198 - -
Vimu4g00099 198 CDD SAM_superfamily 2 62 - -
Vimu4g00099 198 Gene3D - 1 70 IPR013761 -
Vimu4g00099 198 SUPERFAMILY SAM/Pointed domain 5 64 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00099 Vimu-Chr4 603899 604495 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00099 - - gmx:102660142 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00099 4 603899 604495 Vimu4g00099 4 603899 604495 ECH
Vimu4g00099 4 603899 604495 Vimu11g02752 11 47821827 47822459 PCT