Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02752 ATGGATTGGTTCTCATGGCTCTCAAAAACAAGCCTTGAGCCAACCCTAGTGTATGAGTATGGTCTTACTTTTGCACACAATGAGCTTGAAGAAGAAGACATGATATACTTCAACCATGAGTTTCTGATGAGCATGGGAATCTCCATAGCCAAACACAGGTTAGAGATTCTGAAGCTGGCAAGGAAAGTGAAGGGAAAGAGAGCACCACGCCCTGTGGCAAGGCTCATGGTGGCGATCAAGAGGACAAAGAGGTGCTTGGCCAATTACTTTCGCACGTTCATCAGCTGTGAAGAAGAGTCTGCAGCACTTGTTGTGGTGCCATCATCGTTATCATCGTCATCAAGGACAAGGCCTTATGGGACAAGATGGAAGACTCATGTCATGAAGAGGAACAAAAGCAAAAAGTTGATGGTGGCTAAGCAAGAGAGGCTCTTGCTCACTAATGGAAGTCCCAACACTGTGATGCATGGTCTTGATGGGTTTACCAGTCCCATGGTTTACCATTTCAACAAGGAGGAAAAAAAGGAAGGAGATGATGATGATGATGGTGGTGGTGGATACTGGTCTTCAGCTTCTGCTGCTGCAGAAGAAATCAGGTGGGATACCATGTTTCAGGATCTAAAGCCAAACTGA 633 0.4566 MDWFSWLSKTSLEPTLVYEYGLTFAHNELEEEDMIYFNHEFLMSMGISIAKHRLEILKLARKVKGKRAPRPVARLMVAIKRTKRCLANYFRTFISCEEESAALVVVPSSLSSSSRTRPYGTRWKTHVMKRNKSKKLMVAKQERLLLTNGSPNTVMHGLDGFTSPMVYHFNKEEKKEGDDDDDGGGGYWSSASAAAEEIRWDTMFQDLKPN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02752 210 Gene3D - 1 68 IPR013761 -
Vimu11g02752 210 PANTHER OSJNBA0033G05.11 PROTEIN 1 210 - -
Vimu11g02752 210 CDD SAM_superfamily 2 62 - -
Vimu11g02752 210 SUPERFAMILY SAM/Pointed domain 6 67 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02752 Vimu-Chr11 47821827 47822459 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02752 - - pvu:PHAVU_010G157800g 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02752 11 47821827 47822459 Vimu11g02752 11 47821827 47822459 ECH
Vimu4g00099 4 603899 604495 Vimu11g02752 11 47821827 47822459 PCT