Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02660 ATGGGCTTAGTTTGCAGCAGCAGAGAGGAAATGCAGAAAATGAAGAACCTTGGTAGCATTGGAAGCAGTGGGAGGCTATCAGCAGAAGAGTATGAGGATGAGGATATTTCAAAGCTCGCCATCTCCACGTTTCAGTCTAAGGAAGAAGAAATTGAGAGGAAAAAAATGGAGGTCAGAGAGAAAGTTGAACTCCAACTTGGTCGTGCTGAAGAAGAGACTAGGCGCTTGGCGCACATTTGGGAAGAACTTGAAGTGCTTGATGATCCCATGAGGAAGGAAGTTGCAATGTTACGCAAGAAGATTGACTTGGCTAACAGAGATTTAAAGCCACTGGGACTTAACTACCAGAAGAAGGAGAAAGAGTGTAAAGAAGCCTTGGAAGCATTCAACGAAAAAAACAAAGAGAAGGCTCATCTGGTTGCTACACTTGTTGAGATGCTGACTGAGAGTGAAAGAATGAGGATGAAGAAACTGGACGAGCTATGCAAGACAATAGAGTCTCTGTCTTTGAAACCATAA 519 0.4335 MGLVCSSREEMQKMKNLGSIGSSGRLSAEEYEDEDISKLAISTFQSKEEEIERKKMEVREKVELQLGRAEEETRRLAHIWEELEVLDDPMRKEVAMLRKKIDLANRDLKPLGLNYQKKEKECKEALEAFNEKNKEKAHLVATLVEMLTESERMRMKKLDELCKTIESLSLKP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02660 172 Coils Coil 115 135 - -
Vimu3g02660 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 9 167 IPR007033 -
Vimu3g02660 172 Pfam Transcriptional activator 15 167 IPR007033 -
Vimu3g02660 172 Coils Coil 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02660 Vimu-Chr3 40837872 40839075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02660 - - gmx:100794044 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02377 6 20775475 20777075 Vimu3g02660 3 40837872 40839075 ECH
Vimu3g02660 3 40837872 40839075 Vimu3g02660 3 40837872 40839075 ECH