Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02374 ATGGCCCTCGAAACGCTCCTTGTCAAGGTCAAAACCGCCATATCAAATAGCTTCGACTCGGTCCCGCCCAAGCTGCTGAAGAAGAAACCCTCGTTCAAGTCCAAACCAAACGTCGGCGTGTTGGCGTTCGAGATCGCCGGCGTCATGTCCAAACTCCTCCATCTCTGGCACTCGCTGTCCGACGCCACCATCGTCCGCATCCGAAACGACGCCGTCAACCTCGAGGGCGTGAGGAAGATCATCTCTAACGACGAGTCCTTCCTCCTCGGACTCGCCTGCGCCGAGTTCGCCGAGTCGCTCCGTGTCGTGGCGAACTCGGTGACCCGACTCGGCGCGCGCTGCGAGGACCCCAACTTGCGCTCCTTCCAGCGGGCCTTCCTCGAGTTCGCGGACTCGGGCTGCGACCCAAAAGGGTGGGCCCTTCCGGGCCCAAAAGAAATCGAATCAAAGCTCAAGAAAATGGAGCGTTACGTGACGCTTACGGCAGCCCTCTACCGCGAAATGGAGGAGCTCACGGTTCTGGAAAGCGGCTTCAGAAAAGCTCTGATCCACGCTGACGCCAACAACGTTGGGAGTAAAGACCAGCAAAAACTCTATGAATTTCAGCAGAAGATTTTCTGGCAGAAGCAAGAGGTGAAGGATCTCAAAGAAAGATCCCTGTGGAGCAGGAGCTTCGACAGCGTTGTCGTGCTCCTTGTAAGGTTCAGTTTTACTGTTTTAGCAAGGATTAAGGTTGTCTTCGGAATCGGTCACCGCATGCCTTGTCTGTCACGTACCTTATCTACTTCGGCCACTGTTTATCCATCTGATCAAAACCCTAATGATTTTGTTGTTTCTGGGTTATTAGAGGAAGAGTCAAAGTTTGATGAAGCGGTAAATGAAGATATGGAAAGTGGGTTTTTTGAGGCCAACTCGAAGCTTCTTAAACCACCGGAGAGCACTTTGGGAGCTTCAGGTTTGGCTTTACACTATGCAAATTTGATAATAGTGATGGAGAAGATGATAAAGTCACCTCACTTGGTTGGAGTAGATGCAAGAGATGATTTATATGGTATGTTGCCGAGGAGCATAAGGTGGGCGTTGAGAGGGAGACTGAGAGGGGTTGGGTTTTGTGCTGGTGATCCTGCTCTTGCTGGAGAATGGAGGGACGCCTTGGGAAGGATATTAGGATGGTTATCACCTTTGGCACACAACATGATCAAATGGCAAAGCGAGAGAAGCTTTGAACAACACAATTTGGTGGCCAAGACCAATGTATTGCTGTTACAGACTTTGTTCTTCGCCAACAAAGATAAGACTGAGGCTGCCATAACTGAACTTCTGGTGGGGTTGAACTATATTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGAATGCGCCAATTCTAATGGGCTTTTGTTCAAGTTGAATAAACCAGCTAATGAGATATGA 1440 0.4986 MALETLLVKVKTAISNSFDSVPPKLLKKKPSFKSKPNVGVLAFEIAGVMSKLLHLWHSLSDATIVRIRNDAVNLEGVRKIISNDESFLLGLACAEFAESLRVVANSVTRLGARCEDPNLRSFQRAFLEFADSGCDPKGWALPGPKEIESKLKKMERYVTLTAALYREMEELTVLESGFRKALIHADANNVGSKDQQKLYEFQQKIFWQKQEVKDLKERSLWSRSFDSVVVLLVRFSFTVLARIKVVFGIGHRMPCLSRTLSTSATVYPSDQNPNDFVVSGLLEEESKFDEAVNEDMESGFFEANSKLLKPPESTLGASGLALHYANLIIVMEKMIKSPHLVGVDARDDLYGMLPRSIRWALRGRLRGVGFCAGDPALAGEWRDALGRILGWLSPLAHNMIKWQSERSFEQHNLVAKTNVLLLQTLFFANKDKTEAAITELLVGLNYIWRFEREMTAKALFECANSNGLLFKLNKPANEI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02374 479 PANTHER BNAC09G50660D PROTEIN 32 463 - -
Vimu3g02374 479 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Vimu3g02374 479 Pfam Protein of unknown function (DUF668) 314 401 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02374 Vimu-Chr3 38217877 38220282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02374 - - gmx:100787581 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02374 3 38217877 38220282 Vimu3g02374 3 38217877 38220282 ECH
Vimu8g01916 8 24821870 24825518 Vimu3g02374 3 38217877 38220282 PCT