Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02360 ATGAGGCTACACCAACTCATTTTGTTCCTGTTGTTGCTCTTTGTTGCCAAAGCGAAGGGGTCTCTACTACCATTCGATCCTCCCAGGGGCATTTTGGCGGAGCTCTTGTCTGATCGATTCCCAGACCCGTTTCACGTGCTGGAACAAATTCCATTTGGGGTGGAGAAAGATGAACAATCGATGGTGATGCCAGCTGCTAGAGTGGACTGGAAGGAGACCCCAGAGGGGCATGAAATAATGGTGGACGTGCCAGGGTTGAAGAGGGAAGAGATAAAGATAGAAGTAGAAGAGAATAGGGTGCTGAGAGTGAGTGGTGAGAGGAAGAGAGAAGAGGAGAAGAAAGGGGATCACTGGCACAGAGTGGAGAGGTCCTACGGCAAGTTCTGGAGGCAGTTCAGGTTGCCACAAAATGTGGACTTGGACAGTGTGAAGGCTAAGCTCGACAATGGGGTCCTCACTTTGACTCTCAACAAGTTGTCACCGGAAAAGATCAAGGGTCCCAGGGTGGTCACCATTGCAGGGGAGGATCACGAGCCATCCAAGCTTACCAATGATGGAGCCAAGCAGGAACTTTGA 576 0.5069 MRLHQLILFLLLLFVAKAKGSLLPFDPPRGILAELLSDRFPDPFHVLEQIPFGVEKDEQSMVMPAARVDWKETPEGHEIMVDVPGLKREEIKIEVEENRVLRVSGERKREEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLDNGVLTLTLNKLSPEKIKGPRVVTIAGEDHEPSKLTNDGAKQEL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02360 191 Gene3D - 32 174 IPR008978 -
Vimu3g02360 191 MobiDBLite consensus disorder prediction 172 191 - -
Vimu3g02360 191 FunFam 22.0 kDa heat shock protein 29 172 - -
Vimu3g02360 191 Pfam Hsp20/alpha crystallin family 69 172 IPR002068 -
Vimu3g02360 191 SUPERFAMILY HSP20-like chaperones 60 169 IPR008978 -
Vimu3g02360 191 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 54 170 IPR031107 -
Vimu3g02360 191 CDD ACD_ScHsp26_like 67 158 - -
Vimu3g02360 191 ProSiteProfiles CS domain profile. 63 170 IPR007052 -
Vimu3g02360 191 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 59 175 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02360 Vimu-Chr3 38066764 38068153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02360 K13993 - gmx:100526965 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01887 8 24538557 24541322 Vimu3g02360 3 38066764 38068153 PCT