Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01811 ATGTTGTGGCTCATGAGATTCTCGGGCTTTTTCTCCGCCGCAATGCTCCTCATTCTCCTCTCCCCCTCCCTCCAATCCTTCCACCCCGCCGAAGCCATCCGCTCCTCCCACCTCGACGCCGTCCTCCGCCTCCCTCTCCAGACGTCACCACTCTCCTTCCGCCGCGCCGCCCCATTCCGCAATGCCGACAAATGCGCCTCCAATCGTACCTCCATTCCCGAGAATACCAGCGTCTGCGATCCCTCCCTAGTCCACGTTGCCATCACTCTAGACGTCGAATACCTCCGCGGCTCCATCGCTGCCGTCCACTCCATCCTCCAACACTCCCAGTGCCCGGAGAACATCTTCTTCCACTTCCTCGTCTCCGAGACCAGTCTACAATCCCTTGTCAAATCGACCTTCCCGCAATTGAACTTCAAGGTCTATTATTTCGATCCAGAGATCGTTCGCAACCTGATCTCAACCTCGGTGCGCCAAGCTCTGGAGCAACCTCTCAACTACGCCAGAAATTACCTCGCGGATCTTCTCGAGAGCTGCGTGGGGAGGGTTATATATCTAGATTCGGATCTAGTTGTGGTGGACGACATTGCGAAACTGTGGAGCACCAGTTTAGGTTCTAGAACAATCGGCGCGCCTGAGTACTGTCACGCGAACTTCACCAAGTACTTTACGGCGGGGTTTTGGTCGGACGCGCGGTTCGCGGGCGCGTTCATGGGGAGGAGACCGTGCTACTTCAACACGGGTGTGATGGTGATAGATCTGGTGCGGTGGCGGAAACACGGTTACAGTAGAAGGATAGAGAAGTGGATGGAGATCCAGAAGAGCGACCGGATCTACGAACTGGGTTCTCTGCCGCCGTTTCTGCTGGTGTTCGCGGGACACGTGTGTCCCATTGAGCACAGGTGGAATCAGCACGGATTGGGTGGCGATAACGTGAAAGGGAGTTGCCGGGACCTTCACGCTGGGCCTGTGAGTCTGTTGCATTGGTCTGGAAGTGGCAAGCCCTGGCTGCGATTGGACTCTAGACGGCCTTGTCCACTTGACGCACTTTGGGCTCCTTATGATTTGTACGGACACTCTCAGTGA 1086 0.5635 MLWLMRFSGFFSAAMLLILLSPSLQSFHPAEAIRSSHLDAVLRLPLQTSPLSFRRAAPFRNADKCASNRTSIPENTSVCDPSLVHVAITLDVEYLRGSIAAVHSILQHSQCPENIFFHFLVSETSLQSLVKSTFPQLNFKVYYFDPEIVRNLISTSVRQALEQPLNYARNYLADLLESCVGRVIYLDSDLVVVDDIAKLWSTSLGSRTIGAPEYCHANFTKYFTAGFWSDARFAGAFMGRRPCYFNTGVMVIDLVRWRKHGYSRRIEKWMEIQKSDRIYELGSLPPFLLVFAGHVCPIEHRWNQHGLGGDNVKGSCRDLHAGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYGHSQ 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01811 361 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 20 359 - -
Vimu3g01811 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 358 IPR029044 -
Vimu3g01811 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 85 344 IPR029044 -
Vimu3g01811 361 Pfam Glycosyl transferase family 8 85 338 IPR002495 GO:0016757
Vimu3g01811 361 FunFam Hexosyltransferase 85 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01811 Vimu-Chr3 32726745 32731123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01811 1 359 Glycosyltransferase AT3G62660 80.110 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01811 - - gmx:100801272 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01811 3 32726745 32731123 Vimu3g01811 3 32726745 32731123 ECH
Vimu6g02078 6 18527457 18533278 Vimu3g01811 3 32726745 32731123 PCT