Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01475 ATGAGAAGGCGCTCTGACCAAACGGAGAAGGGGGCACCAAAGAATCAGAATCCCCGCCTTTGCCTTTTGGCATCCCTTTCTGCTTTCTTCTGGTTCTTGCTCCTTTACTTCCATTTTGTTGTGCTTGCAGGAGATAATAACAATGCCAATAGCGAGAGTGATTACAATACTCATGTTGATCAGCACTCAACCCTGTCTACGACACCTGCCCCGATCCTTGTAATGGATTCCCCTCAATTCCCTTTCATGACAGCAATGAGGGCTGCTGAAAACAAGATTGATCCCTGTGGGGGGAGGTACATTTATGTGCATGATCTTCCCTCCAGGTTCAACGAGGATATGTTGAAGGAGTGCAGGAGTTTGAGTCTTTGGACTAATATGTGCAAGTTCACCTCCAATTCTGGCCTTGGTCCGCCCCTTGAGAATGTTGAAGGGGTCTTCTCTGATACTGGCTGGTATGCTACCAATCAGTTTGCTGTTGATGTTATATTCAGCAATCGAATGAAACAGTATGAATGCTTGACAAATGATTCCTCTGTTGCTGCTGCGGTTTTTGTACCCTTCTATGCTGGATTTGACATTGCGCGCTATCTTTGGGGCTATAATATTTCAGTGAGGGATGCAGCTTCGCTTGATCTTGTTGATTGGCTCATGAAGAGACCAGAGTGGAGCATAATGAATGGCAGAGACCATTTTCTTGTTGCAGGAAGGATAACGTGGGATTTCAGGAGACTGTCTGAGGAAGAATCAGATTGGGGCAATAAGCTTTTGTTTTTACCAGCGGCAAAGAATATGTCCATGCTTGTGGTTGAGTCCAGTCCTTGGAATGCAAATGATTTTGGGATTCCGTATCCTACATACTTCCACCCGGCTAAGGATGCTGATGTGTTCATTTGGCAGGATAGAATGAGGCAACTAGAGAGGAAATGGCTTTTCTCCTTTGCTGGTGCTCCCCGTCCTGGTAACCCCAAATCAATCAGGGGTCAGTTAATTGATCAATGCAGAAGGTCAAAGGTTTGTAAGCTGTTGGAATGTGACTTTGGAGAAAGCAAATGTCACTCTCCCGGCAGCATAATGAAGATGTTTCAAAGCTCGCTTTTCTGCTTGCAACCCCAGGGTGATTCATACACACGAAGATCTGCTTTTGACTCAATGTTGGCTGGTTGTATACCTGTCTTCTTCCATCCTGGCTCCGCATATACACAGTATACTTGGCATCTTCCCAAGAATTACACCAAGTATTCTGTCTTCATTCCAGAGGATGATATCCGTAAGAGGAATATCAGTATAGAGGAAAGGCTTAGTGAGATACCTCCTGAACAAGTGAAGATCATGAGAGAAGAGGTTATTAGTCTCATTCCAAGACTAGTATATGCTGATCCTCGCTCCAAATTAGAAACTCTTAAAGATGCATTCGACGTTGCAGTACAAGCAATAATTGACAAGGTTACAAATTTGAGGAAGGATATCATTGAAGGTCGCACAGATGATGGCTTCATTGAGGAGAACAGTTGGAAATACGCTTTGTTGCCTGAGGGAGAGCATGAGGTGGGACCTCATGAATGGGATCCTTTCTTCTCCAAACCAAAGGATGGTAGTGGAGATTCCAATGATTCCTCTGCTGAAGCTGCAAAAAATTCCTGGAAGAGTGAGCAAGTAAATCAATCATAA 1671 0.4428 MRRRSDQTEKGAPKNQNPRLCLLASLSAFFWFLLLYFHFVVLAGDNNNANSESDYNTHVDQHSTLSTTPAPILVMDSPQFPFMTAMRAAENKIDPCGGRYIYVHDLPSRFNEDMLKECRSLSLWTNMCKFTSNSGLGPPLENVEGVFSDTGWYATNQFAVDVIFSNRMKQYECLTNDSSVAAAVFVPFYAGFDIARYLWGYNISVRDAASLDLVDWLMKRPEWSIMNGRDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADVFIWQDRMRQLERKWLFSFAGAPRPGNPKSIRGQLIDQCRRSKVCKLLECDFGESKCHSPGSIMKMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKRNISIEERLSEIPPEQVKIMREEVISLIPRLVYADPRSKLETLKDAFDVAVQAIIDKVTNLRKDIIEGRTDDGFIEENSWKYALLPEGEHEVGPHEWDPFFSKPKDGSGDSNDSSAEAAKNSWKSEQVNQS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01475 556 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 79 477 IPR004263 GO:0006486|GO:0016757
Vimu3g01475 556 Pfam Exostosin family 96 433 IPR040911 -
Vimu3g01475 556 MobiDBLite consensus disorder prediction 532 556 - -
Vimu3g01475 556 MobiDBLite consensus disorder prediction 516 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01475 Vimu-Chr3 27747848 27749596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01475 K20888 - gmx:100780467 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01475 3 27747848 27749596 Vimu3g01475 3 27747848 27749596 ECH
Vimu6g02481 6 21560953 21562695 Vimu3g01475 3 27747848 27749596 PCT