Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01409 TCGGATATTCATTCCGACAACACTGCCACGTCGGATATTCTTCCCGACGACACTGCCACGTCGGATATTCTTCCCGACGACACGGCCGCGTCGGAAGACGAGATTGCCCCGTCAGAAACTCTCTCCGAAGAGAGCGTGGCCCAAGAGCAATCGAGCGACGACGTCGTTGAGCTTGAGTCCCTTCTACGGACAAAAATGAGAGCCAGCGAAATCGACGAAGCGCTCCTCGTCCTGGATCGTCTAATTGAACTGGAACCGGAAGAGCTGGAGTATCCGTTCGTGAAGGCGCACCTGCAGCTGCTCAACGGCGAGCACAAACTCGCCTCGATGGGGTTTGAGGAATTGCTTCAGAGGGATCCATTCCACTTGGAGACGTATCGATGCCTGTTAATGCTAATTTCGGAGACGAAGGCGCCGACCGTGGAGCTTCTGAAGAAAATCGAAGAGGCCGTGAAGGTTTGCGCGGAACAAGAGAGGGATTCCGATGTGAGAGACTTTAAGTTGTTGATTGCGCAGATAAAGGTTATCGATGGGGATTTATATGATGCGTTGAAGGTGTATGAGGAGCTTGCGAAGGAAGAACCCAAGGATTTTAGACCTTACTTGGGTCAGGGTATTGTGTATACTATGCTGAAAAAGAATGATGAAGCTGAGAAGCAGTTTGAAATGTTTGGCACGCTTGCTCCCGAGAATCATCCATATAAGCAGTATTTTGAGGACAATTCTAGGATTTTGGAGACGGGACTACAAGACGCAAAGAGCTGA 765 0.5007 SDIHSDNTATSDILPDDTATSDILPDDTAASEDEIAPSETLSEESVAQEQSSDDVVELESLLRTKMRASEIDEALLVLDRLIELEPEELEYPFVKAHLQLLNGEHKLASMGFEELLQRDPFHLETYRCLLMLISETKAPTVELLKKIEEAVKVCAEQERDSDVRDFKLLIAQIKVIDGDLYDALKVYEELAKEEPKDFRPYLGQGIVYTMLKKNDEAEKQFEMFGTLAPENHPYKQYFEDNSRILETGLQDAKS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01409 254 MobiDBLite consensus disorder prediction 1 53 - -
Vimu3g01409 254 Gene3D Tetratricopeptide repeat domain 38 253 IPR011990 GO:0005515
Vimu3g01409 254 MobiDBLite consensus disorder prediction 1 17 - -
Vimu3g01409 254 SUPERFAMILY TPR-like 66 232 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01409 Vimu-Chr3 26751246 26754308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01409 - - vra:106770360 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01409 3 26751246 26754308 Vimu3g01409 3 26751246 26754308 ECH
Vimu6g02601 6 22598993 22599745 Vimu3g01409 3 26751246 26754308 PCT