Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01382 ATGCTTGGTTCATCCACGCACTGTTTTTTCTTACCTGTAAAGCGCAAACCTGGAGCTCGTAATAAAGAGATATTATTATTCCTTAGAACAGAAGAGAAAGATGCACCTAGCCTTTTTTCTAAGCTCTTTCTTTCTCTCTCTTTTTTGTTGGAGAAAAACAATGAGAATGGAGTTGAAGAAGAAGATATCCAAGTACTGATTTTGGTTATGGGGATTATTTTCAAAGAGGGGTGGCTGATGGATTCCTCAAACGAATTGAAACATTCCGCACCGGTGAAGGAGGCGCCATCTGTCAGTGACATGGACACGCTCAACCCTAGGATGTTTGTGGGGACGTGGAATGTGGGAGGAAAGTCACCAAACCAAGGATTGAACTTGAGGGAATGGTTGATGTTGCCTTCACCAGCTGATATCTATGTCATTGGGTTCCAAGAAATTATACCTCTAAACGCAGGGAACGTGCTTGGGCCAGAGGATAGTGGCCCAGCAACGAAGTGGCTAACTCTGATTCGTGAAGCCTTGAACTCTAACACTGGTGAAGAAAGTTGTACTAGATTATGTAGCCCAAGTGAACATGAACAACAACCCTATTATTGCCTTGCAGCAAGTAAACAAATGGTGGGTATCTTCTTGTGCGTGTGGGTACGTGAGGATCTTTACAAGCATGTCACCAATTTAAAAGTGTCTTGCGTTGGTAGAGGCATCATGGGCTATCTGGGAAATAAGGGTTCAGTATCGATTAGCATGACATTGTATCAAACGACGTTTTGCTTTGTTGGTACCCACTTGGCCTCTGGAGAGAAAGATGGTGACGAGATTCGAAGAAATTTAGACGTATCAGAGATCTTAAAGAAAACTAAATTTTCTCACTCATTCAAAGCTCTTGGCCAACCACTCCCTCCTCCTGAAACCATATTAGAGCATGACAAGATTATTTGGCTTGGGGATTTGAATTATCGCCTTGCTGCTGGTTATGATGATACACTTGAACTACTGAAAAAGAATGATTGGCAAGCACTATTAGAGAAGGATCAGCTGAGGATAGAGCAAAGAGCTGGTAGAGTGTTCAAAGAATGGAAGGAAGGGAAGATATACTTTGCTCCAACTTACAAATACTTATTTGATTCTGACCAGTATGTTGCTCAAACAAACAAGTCCAAGGAAAAACGACGAACACCGGCTTGGTGCGATCGAATTCTGTGGAAAGGAGAAGGCGTGGAGCAGTTATGGTACGTGAGAGGAGAGTCAAAATTCTCAGACCACAGGCCAGTGTATTCACTGTTCTCGGTTCGTGTGGACATGACATGTAAGAAGCTAAGTTCCTGTGTCTCTGCATCAGAGAGTGGCTCAATCTCAATGTCAAGGTCATGCTCCTCTAGAACCCTGACAAACACTGCCTTGTCCTCTTCTTGCTTTGCTAAAGTTCAGGCGGAGGAACAGCTATTGTTACTAACCAGGGAACATAGACACCGAACCTGCAGGATTCTCATTTAG 1494 0.4331 MLGSSTHCFFLPVKRKPGARNKEILLFLRTEEKDAPSLFSKLFLSLSFLLEKNNENGVEEEDIQVLILVMGIIFKEGWLMDSSNELKHSAPVKEAPSVSDMDTLNPRMFVGTWNVGGKSPNQGLNLREWLMLPSPADIYVIGFQEIIPLNAGNVLGPEDSGPATKWLTLIREALNSNTGEESCTRLCSPSEHEQQPYYCLAASKQMVGIFLCVWVREDLYKHVTNLKVSCVGRGIMGYLGNKGSVSISMTLYQTTFCFVGTHLASGEKDGDEIRRNLDVSEILKKTKFSHSFKALGQPLPPPETILEHDKIIWLGDLNYRLAAGYDDTLELLKKNDWQALLEKDQLRIEQRAGRVFKEWKEGKIYFAPTYKYLFDSDQYVAQTNKSKEKRRTPAWCDRILWKGEGVEQLWYVRGESKFSDHRPVYSLFSVRVDMTCKKLSSCVSASESGSISMSRSCSSRTLTNTALSSSCFAKVQAEEQLLLLTREHRHRTCRILI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01382 497 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 78 447 IPR045849 GO:0004445
Vimu3g01382 497 FunFam Type I inositol polyphosphate 5-phosphatase 8 87 454 - -
Vimu3g01382 497 SUPERFAMILY DNase I-like 104 433 IPR036691 -
Vimu3g01382 497 SMART i5p_5 104 436 IPR000300 GO:0016791|GO:0046856
Vimu3g01382 497 Pfam Endonuclease/Exonuclease/phosphatase family 111 421 IPR005135 GO:0003824
Vimu3g01382 497 Gene3D Endonuclease/exonuclease/phosphatase 88 454 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01382 Vimu-Chr3 25984304 25988910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01382 105 451 Acyl Lipid Metabolism Gene Families AT1G65580 30.711 4.35e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01382 - - vra:106771110 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01382 3 25984304 25988910 Vimu3g01382 3 25984304 25988910 ECH
Vimu6g02608 6 22692464 22696312 Vimu3g01382 3 25984304 25988910 PCT