Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01198 GCAGTACCTCAGTCATATATTGTTTCTCTTTCACATCTAAGCATGAAGCCTTTAAGAATGAATAACACATGTATAGTTCCAACTCTGCTCATGCTTTGGATGGTCTTGTCAGGTTCAGCATCAACAAGAGCTGAAGAAGTGGAAGAAACTGAGGACGAAAGAGAGTTTGATTACATGAGAGGAAGTGAAAAGGGACCTCATCATTGGGGAGAGTTAAAGAAAGAATGGTCAGCTTGTAAACATGGACAGATGCAATCTCCCATAGACTTGTCATGTGCCAGAGTCAAAATCATCCCTCGCTGTCAACTACTCCTCACTGATTACTTTTCTTCTAATGCCACCATAATCAACAGAGGCCATGATATTGCTATATATTGGAAGGGTGATGCTGGCTCAATAGACATAAATGGAACCGAATTCTTTCTGAAACAGTGTCATTGGCACTCACCTTCTGAACATTCCATCAATGGCAGGAAGTATGACTTGGAGATGCACATGGTGCATGTAAGTATGGAAAACAAGATTTTTGTGTCTGGTGCTTTCTATAAAATAGGGCATCGCCCCGATCGTTTTCTCTCTCAGCTTGAGAAAGAAATCGAGCACCTTGTTGATGGGGAAGTAGAGAGACAAATTGGAGAGATAAATCCCTCAGGAATACAGACAAGAGGAAATATGTATTATAGGTACTTAGGCTCACTCACCACTCCTCCTTGCACTGAAGGAGTCATCTGGAACATTGATAGAAAGATAAGGACAGTATCGGAAGCACAAGTGAGACTATTGAGAAAGGCAGTGCATGATCATGCAGTGAGGAATTCAAGACCAAGGCAGCCACGTAACCAAAGAGATATATTATACTTCAGATTCAAAAGCAGAGCAAAATCAAAAAAATAA 894 0.4094 AVPQSYIVSLSHLSMKPLRMNNTCIVPTLLMLWMVLSGSASTRAEEVEETEDEREFDYMRGSEKGPHHWGELKKEWSACKHGQMQSPIDLSCARVKIIPRCQLLLTDYFSSNATIINRGHDIAIYWKGDAGSIDINGTEFFLKQCHWHSPSEHSINGRKYDLEMHMVHVSMENKIFVSGAFYKIGHRPDRFLSQLEKEIEHLVDGEVERQIGEINPSGIQTRGNMYYRYLGSLTTPPCTEGVIWNIDRKIRTVSEAQVRLLRKAVHDHAVRNSRPRQPRNQRDILYFRFKSRAKSKK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01198 297 Gene3D Alpha carbonic anhydrase 52 295 IPR036398 -
Vimu3g01198 297 PANTHER CARBONIC ANHYDRASE 53 282 IPR023561 GO:0004089|GO:0008270
Vimu3g01198 297 SUPERFAMILY Carbonic anhydrase 56 286 IPR036398 -
Vimu3g01198 297 SMART Carb_anhydrase_2a 58 288 IPR001148 -
Vimu3g01198 297 ProSiteProfiles Alpha-carbonic anhydrases profile. 54 288 IPR001148 -
Vimu3g01198 297 ProSitePatterns Alpha-carbonic anhydrases signature. 151 167 IPR018338 GO:0004089|GO:0008270
Vimu3g01198 297 CDD alpha_CA_prokaryotic_like 65 286 IPR041891 -
Vimu3g01198 297 Pfam Eukaryotic-type carbonic anhydrase 65 286 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01198 Vimu-Chr3 20442796 20445664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01198 K01674 - gmx:100784540 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01198 3 20442796 20445664 Vimu3g01198 3 20442796 20445664 ECH
Vimu3g01198 3 20442796 20445664 Vimu6g02465 6 21474055 21475990 PCT