Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00707 ATGACTTCTTTATCACAGGGGAAAGCTATGCAGATAGGGAATCCTCTTCTAGAATTTAACACGGATTTCAACTCTAGAGCTGAGTTTTTCTGGTCCCATGGCCTAATATCTGATTCAACTTACGAAATCTTCACCAAAGTATGCAACTATTCCCAAATTAGGAGACAGCATCAAAGTGGGACACTTACCCCCATTTGTTCAGGAGTAAATAGGCTAGTGTCAACGGAAGTTAGTAGATATATTGATACATATGATGTTACACTTGATGTGTGTCTTTCATCAGTAGATCAACAGGCTTATGTGCTGAATCAAATGACTCAACTGGTATATGCTTCATTCATTTTGTGTCTATCTTAA 357 0.3782 MTSLSQGKAMQIGNPLLEFNTDFNSRAEFFWSHGLISDSTYEIFTKVCNYSQIRRQHQSGTLTPICSGVNRLVSTEVSRYIDTYDVTLDVCLSSVDQQAYVLNQMTQLVYASFILCLS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00707 118 Gene3D alpha/beta hydrolase 4 103 IPR029058 -
Vimu3g00707 118 Pfam Serine carboxypeptidase 8 96 IPR001563 GO:0004185|GO:0006508
Vimu3g00707 118 SUPERFAMILY alpha/beta-Hydrolases 9 98 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00707 Vimu-Chr3 7827872 7830042 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00707 K16297 - gmx:100805028 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00707 3 7827872 7830042 Vimu5g01857 5 30432951 30434910 ECH
Vimu3g00707 3 7827872 7830042 Vimu3g00707 3 7827872 7830042 ECH