Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00226 ATGGAATCTGACAATGGAGTTGCTATGGAGGACGAGAAACATGTTATTGGGGAAACAACTAATGAGAACATAAACAAGGAATCTGAAAACAGTTGCAATGCTGAAATTCAGACCAAGAATGAGGCATCTGAATCCATTGTAAAAGTTGAAGGGCCCAAATCTACAGCAAGTAGAAACTCAAAACTTGCCAAGGAACATGGTGGCAAAGGAGATGTTGCTTCAAAGAAGAACAAATCTGTCACCAAAGACAAACCCAATTTGAAGTCCACAACATCACCTCAAACACACAGGCCAAACCTCTCCAAGAGCCTTTCTTTCCCAGCCAAATCAGCTGCTAGAGATGTCATGAAGAAAAGCATTAATGGCAATCTTGTGAAGACAGAAACTAAGCATGTTAATGGGGCCAGAGCTCAGCCTTCTATTCGTCGTTCAAGCAGGCTGACAAACAATGAAGTTAACTCAAAGAAGTCTGATAAAAACACTGGAAATTCAAACCATAGGACCTCTTTAACATCCATGACTAGCCCTAAAAGCTCTGAGATTGGAGAGTCTTCTCCGGTGATGAATGTGGTTTCCAAGAGCCTTACATCTGAGGCATCCTTACCTGTTGATCAGATTTCAATCCCAGCAAAAACTGAAAAACCAAATAAAGAGGACGATGATGCTCACTCCACAACTTCAAGTCATACTCCTCGAAGGAGAAGCAGTGGTTCTGGATTTTCCTTCAGATTGGAAGAAAGAGCAGAAAAGAGGAAGGAGTTCTTCTCAAAGTTAGAAGAGAAAATTCAGGAAAAGGAAGCAGAGAAAACTAATCAGCAAGAGAAATCAAAGGAAAACCAGGAGGCTGAGATCAAGCAATTGAGGAAGACTATGACATTCAAAGCCACTCCAATGCCAAGTTTCTACAAGGAACCTCCTCCAAAAGTTGAATTGAAGAAGATACCTATAACACGCCCAAAATCTCCTAAGCTTGGAAGGAACAAAGGATATGTTGTGAACCATTCAGATGATAAATCTTGCTCTAGTCCTCATGCAAAACAGCAACAGAATGATTCAACCAAGGCAAAGGTAAAGGGTACTAATAAAGAAGTGATTTCAAAGAAACCAATCAGAAAAACTCAAGCCAAGCTGCAGTCTCAGGAAACTGCAATTGGAAAAACTGAGAATAATTCTGTGAAGCCTACTAAAATCAACCAAGATGTCAAAGCAGGCACAGGAAACAATAAAGAATGTCATGATCCTCCAGTTTGCAATTCTGAATATCAAGATGACATGGAGCTAGAATCCAAAACTGAGCTTACTCAGAATGATGCACTGGTCTTAAATTCATCCACACCCGAGATTGTATCATACGAGGTTACTGTGGGAGTGTAG 1374 0.4054 MESDNGVAMEDEKHVIGETTNENINKESENSCNAEIQTKNEASESIVKVEGPKSTASRNSKLAKEHGGKGDVASKKNKSVTKDKPNLKSTTSPQTHRPNLSKSLSFPAKSAARDVMKKSINGNLVKTETKHVNGARAQPSIRRSSRLTNNEVNSKKSDKNTGNSNHRTSLTSMTSPKSSEIGESSPVMNVVSKSLTSEASLPVDQISIPAKTEKPNKEDDDAHSTTSSHTPRRRSSGSGFSFRLEERAEKRKEFFSKLEEKIQEKEAEKTNQQEKSKENQEAEIKQLRKTMTFKATPMPSFYKEPPPKVELKKIPITRPKSPKLGRNKGYVVNHSDDKSCSSPHAKQQQNDSTKAKVKGTNKEVISKKPIRKTQAKLQSQETAIGKTENNSVKPTKINQDVKAGTGNNKECHDPPVCNSEYQDDMELESKTELTQNDALVLNSSTPEIVSYEVTVGV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00226 457 MobiDBLite consensus disorder prediction 1 20 - -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 211 228 - -
Vimu3g00226 457 Pfam Targeting protein for Xklp2 (TPX2) domain 240 308 IPR027329 -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 59 83 - -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 356 370 - -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 263 416 - -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 263 288 - -
Vimu3g00226 457 Coils Coil 370 390 - -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 1 245 - -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 372 405 - -
Vimu3g00226 457 Coils Coil 248 290 - -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 21 58 - -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 84 106 - -
Vimu3g00226 457 MobiDBLite consensus disorder prediction 138 203 - -
Vimu3g00226 457 PANTHER PROTEIN WVD2-LIKE 4 65 450 IPR044833 GO:0008017
Vimu3g00226 457 MobiDBLite consensus disorder prediction 334 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00226 Vimu-Chr3 1968074 1970391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00226 - - gmx:100798810 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02229 6 19518499 19520665 Vimu3g00226 3 1968074 1970391 PCT