Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02558 ATGAAGATCTCCGGCGGGACCACCCGCGCCCCGCGCCCATTCCCGTCGCCCATTGCAGTTCCCTCACCGGACTCCGATCTCCAGCCGCACCGCCGGCCATCCCGCCGAAATCCCCGAACTCCAGCTCGCCTCAAGCGGCTCGCCGGAACTTCGGCTGGAAAACGGAGCAGGCCAGAAACCCCCTTGTCCAAGTGGAAGATCCACGGCGGCGTCAGCGGTGGCGGTGATCCGCTCGAGGAGCTCGACAGGGAAAAGGAACTTCCGCCTCCCGCTGCCGTGTCGGTGAGGAAGCTCGCTGCTGCACTATGGCGGCTGCAGCTGCCGGAAACAGCGGCGAGCGATGGCGGAAGGCGAAGGGGTTTGAGAAAGATCGGTGAAGATCGTTTGGGAGTTGTTGAGCGTGAAACTGGCCATGTAGACCATCAATTTCTCAGCCATCAAAATGGCATGATGCATGGTTCTGCTATGAAGAATCCATCACAAAGTCCTCGTACCATTTCAGGGACTAAGGGTGGACACTTTTGTGAGCTCAAGCCGCCTTTCCAGTTTTCAAGTACTGCAATGGAGGGTGCAACAAAGTGGGATCCTGTTTGTTTACAAACATCAGATGAGGTGCAAAATATCTACAGTCAAATGAAACTTCTTGACCAAAAGGTTAGTAATGCTTCTGCTGTATCTGCTCTTGAAGCTGAACTAGAGCAGGCTCGTGCACAGATTCAGGAGCTTGAGACTGAGCGCCACTCCTCCAAAAAGAAACTTGAACATTTCTTGAAGAAAGTGGGTGAAGAGAGGGCCTCATGGCGAAGCAAAGAGCATGAGAAAATTCGTGCTTATGTTGATGACATTAAATCAGAGTTGAGTCGAGAAAGGAAAAGCCGCCAGAGGATTGAAATTGTCAATTCCAGGCTGGTTAATGAGTTAGCTGATACCAAGTTATTAGCAAAACGCTACATACAGGATTATGAGAAGGAAAGGAAAGCCAGAGAATTAATTGAGGAAATTTGTGACGAGCTTGCTAAGGAAATTGGAGAAGATAAGGCTGAAATTGAAGCACTGAAGAGGGAATCTATGAAACTTAGGGAAGAAGTGGAAGAGGAGAGGAAGATGTTGCAGATGGCTGAAGTATGGCGTGAAGAGCGTGTTCATATGAAATTGATTGATGCCAAAGTTGCACTTGATGAAAAGTACTCACAGATGAATAAATTGATTGCTGATTTGGAAACCTTTGTCAAATCAATGAATGTGAACCCAAATGCAAAGGATATGAAAGAGGCATGGTCACTTCAACAGGCTGCAGCTGCTGTAGACATTCAAGACATTAAGGAATTTTTGTATGAGCCAGCTAATCCAGATGATATTTTTTCCATTTTTGAAGATTTAAATTTCGTTGAACCCAACGAGAAGGATATTGAATCATGTGTTGCTTACTCTCCAGTAAGTCATGCCTCAAAGATTCACACAGTGAGTCCTGAAGGCAACTTGATTAGTAAGGATAACTTTCAAAGATGTTCTAATTTATTTATTGATGACAATGGTGATATTGAGGAAGATGAAAGTGGATGGGAAACGGTGAGCCATTTAGAGGATCAAGGATCAAGTTGTTCACCTGAAGGGAGTACCCTGTCAGTGACGAAGAATCTTCGAGAAAGTAATGCCTCAGGGAGGAGTGTGCTTGAATGGGAAGACAATGCTGGTGTAGAGACCCCAATAACTGAAATTAGTGAAGTGTCATCAGTACCAGCTAAGCAATCAAAGAAGGTATCCTCCATTGCAAGGCTTTGGAGGTCTGGTCCAAACAGTGGGGATAATTACAAGATAATCTCTGTGGAGGGAATGAATGGAAGGGTATCTAACGGGGGCGTAATGTCTCCTGATTGGGGACTTGACAAAGGTGGACTAAGCCCCCAAGAACTTCTGATCCAGTTCAGTTCTCCTGAGTCAGCAAATCTGCAAAATCGAGGCATGAAAGGGTGCATTCCTCGCACTGTGCAGAAGAGTAGTTTGAAAGCCAGACTTTTGGAGGCTAGGATGGAAAGCCAGAAGGTTCAGTTGCGCCATGTTCTTAAACAGAAGATTTAG 2079 0.4651 MKISGGTTRAPRPFPSPIAVPSPDSDLQPHRRPSRRNPRTPARLKRLAGTSAGKRSRPETPLSKWKIHGGVSGGGDPLEELDREKELPPPAAVSVRKLAAALWRLQLPETAASDGGRRRGLRKIGEDRLGVVERETGHVDHQFLSHQNGMMHGSAMKNPSQSPRTISGTKGGHFCELKPPFQFSSTAMEGATKWDPVCLQTSDEVQNIYSQMKLLDQKVSNASAVSALEAELEQARAQIQELETERHSSKKKLEHFLKKVGEERASWRSKEHEKIRAYVDDIKSELSRERKSRQRIEIVNSRLVNELADTKLLAKRYIQDYEKERKARELIEEICDELAKEIGEDKAEIEALKRESMKLREEVEEERKMLQMAEVWREERVHMKLIDAKVALDEKYSQMNKLIADLETFVKSMNVNPNAKDMKEAWSLQQAAAAVDIQDIKEFLYEPANPDDIFSIFEDLNFVEPNEKDIESCVAYSPVSHASKIHTVSPEGNLISKDNFQRCSNLFIDDNGDIEEDESGWETVSHLEDQGSSCSPEGSTLSVTKNLRESNASGRSVLEWEDNAGVETPITEISEVSSVPAKQSKKVSSIARLWRSGPNSGDNYKIISVEGMNGRVSNGGVMSPDWGLDKGGLSPQELLIQFSSPESANLQNRGMKGCIPRTVQKSSLKARLLEARMESQKVQLRHVLKQKI 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02558 692 MobiDBLite consensus disorder prediction 1 82 - -
Vimu2g02558 692 Coils Coil 225 259 - -
Vimu2g02558 692 PANTHER GB|AAF24581.1 36 686 IPR043424 -
Vimu2g02558 692 Coils Coil 321 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02558 Vimu-Chr2 21802954 21807235 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02558 - - gmx:100795752 1144.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02558 2 21802954 21807235 Vimu1g00450 1 2725953 2729241 ECH
Vimu2g02558 2 21802954 21807235 Vimu2g02558 2 21802954 21807235 ECH
Vimu2g02558 2 21802954 21807235 Vimu1g00450 1 2725953 2729241 PCT