Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00450 ATGAAGTATACCGGCAAGGCGACTTTCCCGGCGGGCATTGCTTCGAGGGGCGTGAGCAACCCTTCGCCGGACTGGGATCTTGAACCGGCGCGGCCTTTCCAGCGGCGGAAACCGAGAACTCCGGGGACACGGTTGAGGAGACACGGTGGAAAACGGAGCAGACCTGAAACCCCTCTGTTGAAGTGGAAGATCCATGAGGATCCACTCGAAGAGGACCAGAAGTCTTCTTTGTCGGGGTCTCGTCGGAGAACGCGCCGGAGCGCCAAAAAGCAAACGGAGGTGGCCGTGTCGGCCCGGAGACTGGCCGCCGGGCTTTGGCGGTTGCATCTGCCGGAGACTGTCTCTGGGGATGGCCGGAAGGGGTTGGAACACAAGCATGGAAATGGCCACGCAAGGCACCGGTTCCTTGGTCATCCAAATGGCATGATCCATGAATTCGATCTGAAGAAGAATCCATCGCAAAGTCCCCGTTCCATATTTGGGGCAAAGAATGGACACTTCTGTGAGCCTGAACGTTTCCAGTTTTCCAACACTGAAAGGGAGGGTGCAACAAAATGGGATCCTTTATGTTTAAAAACGTCAGATGAAGAGGCACATCATATCTACAGACACATGAAACTTCTTGACCAAAAGGCAAGTGCGGTATCTGTGGTATCTGCTCTCGGAGCTGAACTAGAGCAGGCTCGGGCACGAATTCAGGAGCTTGAGACCGAGCACCGATCCTCCAAAAAGAAGCTTGAACATTTCCTGAAGAAAGTCAGTGAGGAAAGGGCGCAATGGAGGAGCAGAGAGCATGAGAAAATCCATGCATACATCGATGACATTAAATCAGAGTTGAGTAGAGAAAGAAAAAATCGCCAGCGGATTGAAATTGTCAATTCAAGGTTGGTAAATGAGTTGGCCGATGCCAAACTCTCTGCAAAGCGCTACATGCAAGATTATGACAAGGAAAGGAAGGCCAGAGAATTGATTGAGGAGGTATGTGATGAGCTTGCCAAGGAAATTGGAGAAGACAAGGCTGAAGTTGAAGCATTGAAGAGGGAATCTATGAAACATAGGGAAGAAGTGGAAGAAGAGAGGAAGATGTTACAGATGGCGGAAGTATGGCGTGAAGAACGTGTTCAAATGAAGTTGATAGATGCAAAAGTTGCTCTTGAAGAGAAGTATTCACAGATGAATAAACTTGTTTCGGATTTGGAAAGTTTTATCAGGTCAAGAAGTGCAGATCCGATAACAACAGAGCTGAGAGAGGCACAGTCACTTCAACAGGCTGCAACTGCGATGAACATTCAAGACATCAAGGGGTTTTCATACGAACCCCCTAACTCTGATGACATTTTTGCTATTTTTGAAGAAGCAAATTTTGGTGAAGCAAATGAGAGGGAGATTGAACACCGTGCTTCTCACAGTTCTACTAGTCATGCCTCGAATACTCACATTGTGAGTCCTGAAGCCAATGGTATAACTAATGATGGCATTCAGAGGCGTTCTGATGTATTTGTGGATGATAACGGGGATCTAGATGGAGATGAAAGTGGATGGGAAACTGTGAGCCATGTTGACGATCAAGGCTCGAGTTATTCACCAGAAGGGAGTACCCTATCTTTGAACAGGAATCATCGAGAGAGTAATGTCTCAGGGAGAAGTGTACTTGAATGGGAAGAAACTGCTGGTGAGGAGACACCAATAACTGAAATAAGTGAAGTGTGCTCTATAGCAACTAAGCAGTCAAAGAAGGTATCATCCATAACAAGGCTTTGGAGGTCATACCCAAACAACGGGGATAATTACAAGATAATCTCTCTAGAGGAAATGAATGGGAAGCTTTCAAATGGAAGGTTATCTAATGGGGTCATAATGTCTCCTGACCATGGATCAGGTAAAGGTGGATTGAGCCCCCAAGACCTTCTATACCAGTTGAGTCCTGAGTCCGGAAGTCCACATGCACATAAAGGTGGTATGAAAGGATGCATTCCTCGCGGTGCACAGAAGAATAGTTTGAAAGCCAGACTTTTGGAGGCTAGAATGGAAAGCCAGAAGGTTCAGTTGCGCCATGTTCTTAAACAGAAGATTTAG 2076 0.4701 MKYTGKATFPAGIASRGVSNPSPDWDLEPARPFQRRKPRTPGTRLRRHGGKRSRPETPLLKWKIHEDPLEEDQKSSLSGSRRRTRRSAKKQTEVAVSARRLAAGLWRLHLPETVSGDGRKGLEHKHGNGHARHRFLGHPNGMIHEFDLKKNPSQSPRSIFGAKNGHFCEPERFQFSNTEREGATKWDPLCLKTSDEEAHHIYRHMKLLDQKASAVSVVSALGAELEQARARIQELETEHRSSKKKLEHFLKKVSEERAQWRSREHEKIHAYIDDIKSELSRERKNRQRIEIVNSRLVNELADAKLSAKRYMQDYDKERKARELIEEVCDELAKEIGEDKAEVEALKRESMKHREEVEEERKMLQMAEVWREERVQMKLIDAKVALEEKYSQMNKLVSDLESFIRSRSADPITTELREAQSLQQAATAMNIQDIKGFSYEPPNSDDIFAIFEEANFGEANEREIEHRASHSSTSHASNTHIVSPEANGITNDGIQRRSDVFVDDNGDLDGDESGWETVSHVDDQGSSYSPEGSTLSLNRNHRESNVSGRSVLEWEETAGEETPITEISEVCSIATKQSKKVSSITRLWRSYPNNGDNYKIISLEEMNGKLSNGRLSNGVIMSPDHGSGKGGLSPQDLLYQLSPESGSPHAHKGGMKGCIPRGAQKNSLKARLLEARMESQKVQLRHVLKQKI 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00450 691 MobiDBLite consensus disorder prediction 1 95 - -
Vimu1g00450 691 MobiDBLite consensus disorder prediction 467 492 - -
Vimu1g00450 691 MobiDBLite consensus disorder prediction 37 51 - -
Vimu1g00450 691 MobiDBLite consensus disorder prediction 52 79 - -
Vimu1g00450 691 MobiDBLite consensus disorder prediction 470 492 - -
Vimu1g00450 691 PANTHER GB|AAF24581.1 35 685 IPR043424 -
Vimu1g00450 691 Coils Coil 218 252 - -
Vimu1g00450 691 Coils Coil 314 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00450 Vimu-Chr1 2725953 2729241 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00450 - - gmx:100795388 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02558 2 21802954 21807235 Vimu1g00450 1 2725953 2729241 ECH
Vimu1g00450 1 2725953 2729241 Vimu1g00450 1 2725953 2729241 ECH
Vimu2g02558 2 21802954 21807235 Vimu1g00450 1 2725953 2729241 PCT