Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02517 ATGGTAAGCAGAACTGTGATGAAAAGTTCTCTTCTCTTTCTCTGTTTCTTCATCTTCTTCACCTTACAACTCTTGGAGGCTCAAAAGCCTCCAGCAGTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAACAATTACTTGCCTTTCTCCGTTGAAAAGGCAATTCTTCCTCACTATGGCATTGATTTTCCAACTAAGAAACCCACTGGCAGATTCACCAATGGCAAGAATGCTGCAGATTTAATTGCTGAAAAATTGGGTCTACCCACTTCACCACCTTATCTCTCCCTTCTGTCTAAAGTCCACAATTCCAACAAAAACATGTCTTTTGTGAGTGGTGTTAACTTTGCCTCTGGAGGTGCTGGAATATTTAATGCCTCAGATAAAGGTTTTATGCAATCAATCCCTTTGCAGAAACAAGTTGACTACTACTCTCAAGTGCATGAAACACTTAGACAGCAAGTAGGAGCATCTTCTCTTGAGAAACACCTCTCAAAGTCTATTTTCATTGTGGTGATCGGTGGCAACGATATCTTTGGTTACTTTGACTCAAAGGATCTTCAAAAGAAAAACACTCCTCAACAGTATGCAGTTTCCATGGCTTCCACATTAAAACTGCAATTACAGAGATTATACAACAATGGTGCAAAGAAATTTGAGGTTGCTGGTGTTGGTCCAATTGGGTGCTGCCCTGCATACAGGCTCAAGAACAAAACAGAATGTGTTTCTGCAGCAAATGACTTGTCAGCCAAATACAATGAAGCCCTTCAAACCATGTTAAAGGAATGGCAGTTAGAGAAAAGAGACATAAGTTATTCCTATTTTGATACTTATGCTGCCCTCCAAGACCTCATTTACAATTCAACTTCTTATGGTGCTTGTTGTGGACTTGGTGAGTTGAATGCCCAAATTCCATGTCTACCAATTTCAAGCATTTGTTCCAACAGACAAGACCATGTTTTCTGGGATGCATTCCATCCTACAGAGGCAGCTTCTCGCATATTTGTGGATGAAATATTCAAAGGACCTTCAAAATTCATATCTCCTATTAATATGGAACAGCTATTGGCTATTTGA 1083 0.398 MVSRTVMKSSLLFLCFFIFFTLQLLEAQKPPAVYVFGDSLVDVGNNNYLPFSVEKAILPHYGIDFPTKKPTGRFTNGKNAADLIAEKLGLPTSPPYLSLLSKVHNSNKNMSFVSGVNFASGGAGIFNASDKGFMQSIPLQKQVDYYSQVHETLRQQVGASSLEKHLSKSIFIVVIGGNDIFGYFDSKDLQKKNTPQQYAVSMASTLKLQLQRLYNNGAKKFEVAGVGPIGCCPAYRLKNKTECVSAANDLSAKYNEALQTMLKEWQLEKRDISYSYFDTYAALQDLIYNSTSYGACCGLGELNAQIPCLPISSICSNRQDHVFWDAFHPTEAASRIFVDEIFKGPSKFISPINMEQLLAI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02517 360 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 31 357 - -
Vimu2g02517 360 CDD SGNH_plant_lipase_like 31 345 IPR035669 -
Vimu2g02517 360 Gene3D SGNH hydrolase 21 346 IPR036514 -
Vimu2g02517 360 Pfam GDSL-like Lipase/Acylhydrolase 33 340 IPR001087 GO:0016788
Vimu2g02517 360 SUPERFAMILY SGNH hydrolase 29 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02517 Vimu-Chr2 21134349 21136921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02517 31 358 Acyl Lipid Metabolism Gene Families AT4G10950 33.529 3.87e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02517 - - gmx:100790145 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02517 2 21134349 21136921 Vimu2g02517 2 21134349 21136921 ECH
Vimu2g02517 2 21134349 21136921 Vimu1g00434 1 2640988 2643918 PCT