Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00434 ATGGGTAAAAAAGGTTATGTGGGCTGTTTCTTCTTTACGATCTATGGCTTTTTCATCTTAAAGTTTGGTTCTTCAGAAGCTAAAATGGTTCCAGCTCTGTACGTGTTTGGAGACTCACTCGTGGACGTCGGCAACAACAATTACTTGACTCTTTCCATTGCAAAGGCAAATCATCGTCACTATGGCATTGATTTTCCCACCCACAAACCCACTGGCAGATTTAGCAACGGCAAGAATGCTGCAGATTTTCTTGCTGAAAAATTGGGTTTGGCAACTTCGCCACCTTACCTCTCTCTAACATCAACGGCCAACAATGCATCTTTCATGGATGGTGTTAGCTTTGCCTCCGCAGGTGCTGGAATATTTGATGGTTCTGACTTACGATATAGACAATCAATACCGCTGAGAAAACAAGTGGACTACTACTCTATTGTGCAAGAGGAAATGACACGAGAAATAGGAGCAGCGGCTATTCAGAAACATCTCTCAAACTCAATTTTTGTTGTGGTGATTGGCAGCAACGACCTGTTTGGATACTTTGAATCATCAGATCTACGTAAGAAAACCACCCCACAACAGTATGTTGATTCCATGCTTCTCTCACTAAAATTACAACTACAGAGATTATACGAAGATGGTGCACGTAAATTTGAGATCGCGGGAGTTGGGACACTGGGATGCTGCCCTGAATTCAGGCTGAAGAACAAAACTGAATGCGTTGTAGAAGTGAATTACTGGTCTGTAAAATATAATGAAGGCCTTCAATGGATGTTGATAGAATGGCAATCAGAGAATAGAGGGATAATCTACTCCTACTTTGACACTTATGCTGCCATCAACGACCTCATTCAGACTCCAGCTTCATATGGATTTAGTGAGGTAAAAGGTGCTTGTTGTGGACTGGGTGAGCTGAATGCCAGGGCTCCCTGCCTGCCATTGTCAAACCTTTGTCCTAATAGACAAGATCACATCTTCTTTGACCAATTCCATCCTACGGAGGCAGCTTCTCGTATATTCGTTAATAGACTTTTCGACGGTCCTTCAGGTTACGCATCTCCCATTAATATGAGACAACTGGTAGCAGCCTGA 1089 0.4288 MGKKGYVGCFFFTIYGFFILKFGSSEAKMVPALYVFGDSLVDVGNNNYLTLSIAKANHRHYGIDFPTHKPTGRFSNGKNAADFLAEKLGLATSPPYLSLTSTANNASFMDGVSFASAGAGIFDGSDLRYRQSIPLRKQVDYYSIVQEEMTREIGAAAIQKHLSNSIFVVVIGSNDLFGYFESSDLRKKTTPQQYVDSMLLSLKLQLQRLYEDGARKFEIAGVGTLGCCPEFRLKNKTECVVEVNYWSVKYNEGLQWMLIEWQSENRGIIYSYFDTYAAINDLIQTPASYGFSEVKGACCGLGELNARAPCLPLSNLCPNRQDHIFFDQFHPTEAASRIFVNRLFDGPSGYASPINMRQLVAA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00434 362 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 31 359 - -
Vimu1g00434 362 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
Vimu1g00434 362 Gene3D SGNH hydrolase 22 346 IPR036514 -
Vimu1g00434 362 Pfam GDSL-like Lipase/Acylhydrolase 33 341 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00434 Vimu-Chr1 2640988 2643918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00434 30 346 Acyl Lipid Metabolism Gene Families AT4G10950 34.783 1.08e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00434 - - gmx:100777307 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00434 1 2640988 2643918 Vimu1g00434 1 2640988 2643918 ECH
Vimu2g02517 2 21134349 21136921 Vimu1g00434 1 2640988 2643918 PCT