Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02503 ATGTCCTCTATATATGCTCATTCCTATATACTACTTCTCTACTTCATCTTCTTCTTTCTCTCATTTCCCAAAGCCATGATGAACAAGTTCAAGAAATCTCAAGTTCTAGTGCTGTGTGTTCTGCTTGTTCTTCTTGTGATCACACCCTATTTACCTTCCTCACTGAGGCCAACCTACTTGTATTTCATCATAAACTTCCTGATCATGTCACTTTGTGCTGAAGCTGGACTCCTTTCAGTTTTTCCCAGGCCTTTGGAAGATAAAAAGCAACCTGCTTATGTGATGGCATCATCAGAAGCAATAAGTTCTGAGAAAAGAGTCTCAGAAGATGATGAAAAGTCAGGAGGAGAATCTGAAAGGGTTGTTTTGCAGAAGTGTCCTCCAATTTTGTTGATAGAAGGTGATGATGAAGAAGTGATGGATGAAGAAGATGAAGCAGAAGAGGAGATTGGAGGAGTTAATGGGCAAGAGCTGTTTGCAAAAGCTGAGGCCTTCATTGGAAACTTCTACAAGCAACTCAAAATGCAGAGTGAGGAATCTTGGATTTATCAGAAAGGCTTTTAG 564 0.4007 MSSIYAHSYILLLYFIFFFLSFPKAMMNKFKKSQVLVLCVLLVLLVITPYLPSSLRPTYLYFIINFLIMSLCAEAGLLSVFPRPLEDKKQPAYVMASSEAISSEKRVSEDDEKSGGESERVVLQKCPPILLIEGDDEEVMDEEDEAEEEIGGVNGQELFAKAEAFIGNFYKQLKMQSEESWIYQKGF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02503 187 Pfam Cotton fibre expressed protein 156 181 IPR008480 -
Vimu2g02503 187 PANTHER OS01G0532300 PROTEIN 27 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02503 Vimu-Chr2 21015767 21017274 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02503 - - vra:106780159 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02503 2 21015767 21017274 Vimu2g02503 2 21015767 21017274 ECH
Vimu2g02503 2 21015767 21017274 Vimu1g00425 1 2579845 2580405 PCT