Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02478 ATGCAAGAGCGAGAGGCTGAAGTGGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAAGATGAAAGAAATTGCTTTCAAGAAGCAAGACGAGCTTGAAGAGATATATGCCCGTGCTCATGTAGAAATAAACCCTGAAGCTGCTCGAGGGAATATTTTGTCATTGATTGACTCTGGAAACATTGAACCATCTGAATTACTGACTGACATGGATAAACAGATAGCTGCAGCAAAAGAAGAAGCTTTAAGCAGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCTGCATGTGAAGAAGAGAGCTGGCTTGAAGACTATAATAGGGTACTTATAATCAACCATCTTCATTCTATGTCCAAGTCTATATTATCTATGATCGCAAGTTTGCATTTTTTGTGGGAAAGTTGA 411 0.3917 MQEREAEVEVERLDQLKASKMKEIAFKKQDELEEIYARAHVEINPEAARGNILSLIDSGNIEPSELLTDMDKQIAAAKEEALSRKEILDKVEKWMSACEEESWLEDYNRVLIINHLHSMSKSILSMIASLHFLWES 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02478 136 Gene3D - 74 110 - -
Vimu2g02478 136 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 109 IPR007145 GO:0000226|GO:0008017
Vimu2g02478 136 Pfam Microtubule associated protein (MAP65/ASE1 family) 7 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02478 Vimu-Chr2 20526722 20534454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02478 5 109 EF-hand Containing Proteins AT5G62250 49.057 4.34e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02478 K16732 - thj:104817685 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02478 2 20526722 20534454 Vimu2g02478 2 20526722 20534454 ECH
Vimu2g02478 2 20526722 20534454 Vimu1g00381 1 2256733 2265564 PCT