Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02454 ATGCGGCACTTCATGGCTCTCTCTAGTGTACTTGCTATACTCATTCTGCAGTACTCATTGGTAGCACTGGTTTCTTCAGAAGGACCACCAAGTGGCTGGAAAACATTGCGTGGATCTCCACCAGTGGTCATAGCACGTGGCGGGTTTTCAGGGATATTTCCAGATTCAAGTTCACTTGCCTATAATTTGGCACTTAACACTAGTAACCCAGATGTGATTCTATGGTGTGATGTGCAATTAACAAAGGATGGCAAAGGGATTTGTTTCCCGGAGCTAAAGCTGGACAATGCCACTGATATTTCAGTTGTTTACCAAGACAAGCAAAAGGATTACTTTGTTAATGGGGTCTCATCCCGGGGATGGTTTTCTGTAGATTACAACTTCAAAGAACTAGCAAATGTTTCTCGTGAGTTTGATCTATCTCAAGACCTTAGCGTTTTTGTTTTTTGGCTAAATTCATGGCTTAATCATGGAATTTGTTCTTGGTGCTTGCCTTTGATCATAACATTTGTTCAGGGAGTTTACTCTCGGACTCCTAAGTTCGATGGCAACAAGCTTCCCATTCTCCATGTTCACGAAGTAGCTAAGTTGATAAAATCGCCATCTACAGGCCTGTGGTTAAATATTCAGCATGATTCGTTCTTCAAGCAACAAAATTTGAGTGTAGAAAAATTTCTACAATCTCTCATTGCTAAAAATGTAACTGTCAGTTACATTTCATCACCTGATGTGGATTTCTTAAAAAGGGTTAAATCAAGATTTAGTCCTGGAACAACCAGCTTGATCTTCAGGGTTCTAGAGCAGTCTGAGATTGAACCTACAACCAATCAATCTTATGGTGAACTCCTGAAAAATCTTAAACAAATCAAGAAATTTGCTTCAGGAATTCTTGTTCCCAAGGGCTATATATGGCCTGTAGACTCAAACCTTTATCTGCAACCACATACCTCTCTTGTCTCAGATGCTCACAAAAAAAAGTTGCAAGTTTTTGTATCAGACCTCATCAATGATGTTCCATTTAGCTACAATTTCAGTTATGATCCTGTGGCTGAGTGTCTATCATTCTTTAATGTTAGTGATTTCTCTGTTGATGGTGTGTTGTCTGACTTCCCAGTTACTCCATCTGCAGCCATAAATTGCTTTTCTGGCCTAGGGGAAAATCCCACTAAACAAGTGGACACTTTGGTTATCACAAAATATGGAGCAAGTGGAGATACTCCTGCTTGTACTGACCTTGCATATAACAAAGCTAAATCAGATGGGGCAGATGTACTTGACTGTCCTGTTCAAATGTCCAAGGATGGAACACCCTTTTGCTTAAGCTCTGTAGACCTTTTAGAGAGCACAACGGTTGCTCATACAAACTTCAAAACCCGTGCTACAACTATTCAGGAGATCAAAAACACCAGTGGCATATATACATTCAGCTTAACATGGGAGGAGATAAAAACATTGACTCCCTCAATATTGAAACCTTACGAGAAATTCAGACTGTTCCGGAATCCAAAATTGCAAAATCAAGGAAAGCTGATAACCTTGTCTGAGTTTTTGTCCTTGACTGAAGGCTCTCGCATCTTGATCGGCATAGAGACTGCTGCATATCTGGCAGAGAAGCAGAATTTAAGTGTGATCAATGCAGTCCTTGATGCTCTAAAGAAAACAAAACCAAGATCACACAAAGTTATGATTCAGTCAACTCATAGCTCTGTGCTTAAAATATTAGATAAATCGAAATTTGAAAGGGTTTACAAGGTTGACGAGAACATTGGCGATGCTTCTGAAACGGCTATTAAGGACATCAAAACATTTGCTGATTCTGTGGTAATAGGAAAGAAGTCTGTTTTTCCTGAAACTGAAGCCTTTTTAGTTAACGCTACAAACATTGTGGCAAAGCTGAAGTCAGCTAAGCTCCGAGTTTATGTAGAAACATTCAGCAATGAATTTGTATCTCAAGCATGGGACTACTACTCTGATGCATCTATTGAGATAAATTCATTTGTCATGGGAACCAAGGTGAATGGCATCATTACTGACTTCCCCAAGACAGCTGACAGATACAGGAGGAACTTGTGCTTAAAGCATGGCAAAAAAGCACCTTACATGAGCCCTATTGAACCTGGAAAACTTTATCGACAGATTTCTGAGTTGTTCCTTCCACCACTTCCCCCTCCATCCCCAGTCTTGATCGATAGTAATGTGACAGAGGCACCTTTGCCCAGAGTTCCAACTGCATAG 2235 0.4027 MRHFMALSSVLAILILQYSLVALVSSEGPPSGWKTLRGSPPVVIARGGFSGIFPDSSSLAYNLALNTSNPDVILWCDVQLTKDGKGICFPELKLDNATDISVVYQDKQKDYFVNGVSSRGWFSVDYNFKELANVSREFDLSQDLSVFVFWLNSWLNHGICSWCLPLIITFVQGVYSRTPKFDGNKLPILHVHEVAKLIKSPSTGLWLNIQHDSFFKQQNLSVEKFLQSLIAKNVTVSYISSPDVDFLKRVKSRFSPGTTSLIFRVLEQSEIEPTTNQSYGELLKNLKQIKKFASGILVPKGYIWPVDSNLYLQPHTSLVSDAHKKKLQVFVSDLINDVPFSYNFSYDPVAECLSFFNVSDFSVDGVLSDFPVTPSAAINCFSGLGENPTKQVDTLVITKYGASGDTPACTDLAYNKAKSDGADVLDCPVQMSKDGTPFCLSSVDLLESTTVAHTNFKTRATTIQEIKNTSGIYTFSLTWEEIKTLTPSILKPYEKFRLFRNPKLQNQGKLITLSEFLSLTEGSRILIGIETAAYLAEKQNLSVINAVLDALKKTKPRSHKVMIQSTHSSVLKILDKSKFERVYKVDENIGDASETAIKDIKTFADSVVIGKKSVFPETEAFLVNATNIVAKLKSAKLRVYVETFSNEFVSQAWDYYSDASIEINSFVMGTKVNGIITDFPKTADRYRRNLCLKHGKKAPYMSPIEPGKLYRQISELFLPPLPPPSPVLIDSNVTEAPLPRVPTA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02454 744 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 392 687 - -
Vimu2g02454 744 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 377 IPR017946 GO:0006629|GO:0008081
Vimu2g02454 744 Gene3D Phosphatidylinositol (PI) phosphodiesterase 393 686 IPR017946 GO:0006629|GO:0008081
Vimu2g02454 744 SUPERFAMILY PLC-like phosphodiesterases 395 687 IPR017946 GO:0006629|GO:0008081
Vimu2g02454 744 ProSiteProfiles GP-PDE domain profile. 41 378 IPR030395 GO:0006629|GO:0008081
Vimu2g02454 744 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 10 741 - -
Vimu2g02454 744 ProSiteProfiles GP-PDE domain profile. 394 687 IPR030395 GO:0006629|GO:0008081
Vimu2g02454 744 Pfam Glycerophosphoryl diester phosphodiesterase family 401 682 IPR030395 GO:0006629|GO:0008081
Vimu2g02454 744 SUPERFAMILY PLC-like phosphodiesterases 40 377 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02454 Vimu-Chr2 20310184 20314367 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02454 1 741 Receptor kinase-like Gene Family AT4G26690 52.261 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02454 - - gmx:100813869 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00358 1 2114193 2118005 Vimu2g02454 2 20310184 20314367 PCT