Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02448 ATGGTTATCGTGATTAAAACAACAATGATAAAAGCAACGAGTTTAATTGCCAGTTCCATAATTGATGACCCTGTGACCTATATTATTAAGTATAACTTACCTTACAATGGTCACAAGAAGGCTGTGGTGTTCGGAAGATTTGCTCGTTCTGTGGTTATCAAAAGAGGTTCTCTGTACCTGACAAATGAATACTTCCTGACTGGCTCTACAAAAACCGTGTCAAAGTTAAAATCTTCTAATCTCTCTGTTTACGTACAAATATTCAACAATGAGTATGTTTCTCAGCGATGGGATTTCATGTCAGATCCAACTGTGCAGATCAACACATTTGTTCAGGATGCTAGCATTGATGGTATCATCACAGGCTTCCTTCAAACAGCCAATAGATACAGAAGGAACAAATGCTTAAATTTGGGTAACAGCACTCCGAATTACATGAAACCAGTCGAAATAGGTGGCCTTTTTCGACTCATAGACAAATCTTCCTTACCACCAGCTATGGCTCCAATCCCTCCCCTGATTGAAGCTAATGTTACAGAACCCCCTTTGGCTCCCTCTTCTGAAATAGGCCCATCTAGTTCTATTACTAGAGCATCAGGAGCACAACCAACAAAAAATGCACAGGCTAAGGTTGTTGTCTGCTTCACCATGTTCTCTCTCACTGTGCTTGTAGCCTCTCTTCTACTTTGA 690 0.4043 MVIVIKTTMIKATSLIASSIIDDPVTYIIKYNLPYNGHKKAVVFGRFARSVVIKRGSLYLTNEYFLTGSTKTVSKLKSSNLSVYVQIFNNEYVSQRWDFMSDPTVQINTFVQDASIDGIITGFLQTANRYRRNKCLNLGNSTPNYMKPVEIGGLFRLIDKSSLPPAMAPIPPLIEANVTEPPLAPSSEIGPSSSITRASGAQPTKNAQAKVVVCFTMFSLTVLVASLLL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02448 229 MobiDBLite consensus disorder prediction 181 201 - -
Vimu2g02448 229 SUPERFAMILY PLC-like phosphodiesterases 50 131 IPR017946 GO:0006629|GO:0008081
Vimu2g02448 229 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 46 218 - -
Vimu2g02448 229 Gene3D Phosphatidylinositol (PI) phosphodiesterase 14 130 IPR017946 GO:0006629|GO:0008081
Vimu2g02448 229 MobiDBLite consensus disorder prediction 186 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02448 Vimu-Chr2 20279116 20280163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02448 46 202 Receptor kinase-like Gene Family AT1G66970 47.853 7.01e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02448 - - vum:124845829 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02448 2 20279116 20280163 Vimu1g00358 1 2114193 2118005 PCT