Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02426 ATGGATACACTGAACACGATCTCAACGGCACTGAACCTGGTCGATTCCAAGAAAGAGAATCTAAAGAAAGCCTTCGATGATCTTCAATCCCTTCTCTCTCCTCTTCCTTTTGCATGGTCAGACCTCGATTCTCACTTCACCTTGCTCCACCACTCTCTCTCCCACCGCCTCCACCTCCTCCAATCCCAAACCCTAACCCTAACCACAACCCCAATTCCCGACCCACCTGCTCAAACCCCCAATGAAGCAAAACTTTCATCAAACCCTAAAAACCCATCATCCAATCATGACGAATCTTCACCTGGGGTGCCCCCCCAAAACGACGCCGTTCCAGGCCCGGTTGCGCCTGGAAACGAATTGGTCGTTCTTTGCAAGAAAATGGACGGCTTGGGGTTGAGAAATTACGTCAATGACAATTTTTTGGACATGGCCAGGGTTCAGGCGGAGCTTTCCGGTGCGTTTCGCCATGCGCCGGACGCGGGTGTGATGGTTCTGGATGCGTTGGAGGGGTTTCATGGTGATGGTAGCGAATTGAAGAAATGGGAATTGAGGAATATGAAGAAGAGTTGTGTTGTGCTGTTGAGGCAATTCAGGGTTGCCGCTCTAAGTGTGAGTGCTGAGGCCAGTTTGAGAGCTGTGAAGTTGGCCCAGGCATGGAAGGAGAAGTTGGTGGGTGATGATAACAACGCGTGTGAAGCTTTGGGGCTTTTGCATTTGATTGCTGCATTTGGTTTGGTGTCTGAATTCAGCTGGGATGAGCTTGTTGACTTTTCGGTCCTGGCCCCCGCCAATGAAGAGTTCCCAGAGCTGTGCCGGGCTGTCGGATTGGCAGAGAAAGTTCCTGATATTGTTCAGAAACTTATAGATAAGGACAAACATATCCCTGCTGTCAAGTATATTCTTGAGTTTAATCTTGCTGATAAGATTCCACCTGTTCCTGTTTTGGAAGCTGCTGTGGATGAGGCTAAGAAACTTGGTAGAAAACTTTCCGAAGAAGGAAATTCATCTAGTGAGAGTACTGCTAGAGAAATTCATACACTGAAATTGGTGATCAAGATTATTGAGAATTATAAGCTTGAAACTGAACACCTACGAGCCAGCGTTGAGCAGCGTATAGAGCAATTAAAGAAGCAGAAGACAAATAATAAACGATCTACTCCAGCACCTGCTTCAAAACCTCAACATAAGCAGCAGCAACAACAGCAAAAGAGGAATATGCAAAAGCAGCAGCAGACTTGGATCAAGCATCCTCGAGCATCTGCTCCAGTTGTTGCTACAGCTGTCCTCAAGAATGCCAATTCAGCAATGCACCACTACCAGCAAACTCGTGTCCATCCATCAGGTTTGTTTCCAGAGCATCCAAATCCCTATAGGAGCTCGCCAGCCATGCCATTTGGCATGATGGCTTCTACCCCAAAATATCTTCCATATGCAGGTCCTTCAGCCAGATCTTATTATGGCCATGATGGTGTCCCAATGGGTCCCCGTGGCAACCCCAATGTAAGTGGTTCTCATCTAAGTTCATCAGAGCCACATGTGCCAACTGGTGGTTATTATGATAGAACCTCTACCTTTGGTGGTAGTGGTCTGCAACATCATTACCAAGCATCTTATTACCCTCAATAG 1626 0.4723 MDTLNTISTALNLVDSKKENLKKAFDDLQSLLSPLPFAWSDLDSHFTLLHHSLSHRLHLLQSQTLTLTTTPIPDPPAQTPNEAKLSSNPKNPSSNHDESSPGVPPQNDAVPGPVAPGNELVVLCKKMDGLGLRNYVNDNFLDMARVQAELSGAFRHAPDAGVMVLDALEGFHGDGSELKKWELRNMKKSCVVLLRQFRVAALSVSAEASLRAVKLAQAWKEKLVGDDNNACEALGLLHLIAAFGLVSEFSWDELVDFSVLAPANEEFPELCRAVGLAEKVPDIVQKLIDKDKHIPAVKYILEFNLADKIPPVPVLEAAVDEAKKLGRKLSEEGNSSSESTAREIHTLKLVIKIIENYKLETEHLRASVEQRIEQLKKQKTNNKRSTPAPASKPQHKQQQQQQKRNMQKQQQTWIKHPRASAPVVATAVLKNANSAMHHYQQTRVHPSGLFPEHPNPYRSSPAMPFGMMASTPKYLPYAGPSARSYYGHDGVPMGPRGNPNVSGSHLSSSEPHVPTGGYYDRTSTFGGSGLQHHYQASYYPQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02426 541 Coils Coil 358 385 - -
Vimu2g02426 541 MobiDBLite consensus disorder prediction 381 416 - -
Vimu2g02426 541 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 116 405 - -
Vimu2g02426 541 MobiDBLite consensus disorder prediction 80 102 - -
Vimu2g02426 541 MobiDBLite consensus disorder prediction 375 419 - -
Vimu2g02426 541 MobiDBLite consensus disorder prediction 488 526 - -
Vimu2g02426 541 Pfam Frigida-like protein 117 386 IPR012474 -
Vimu2g02426 541 MobiDBLite consensus disorder prediction 68 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02426 Vimu-Chr2 19923777 19927768 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02426 - - gmx:102669439 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02426 2 19923777 19927768 Vimu2g02426 2 19923777 19927768 ECH
Vimu2g02426 2 19923777 19927768 Vimu1g00346 1 2035042 2037747 PCT