Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02354 ATGGTAGCGAAAATTCGGCAAAGTGCTACTGAGTCTCCTAATCCAAAACCTGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCATTTATTAAGAAGGCAAAACCTTATTCTGCTGAGAGAGTATTGGCCAAGGAGACACAACTTCATGTAGCCCAAAAAGAGCTGAACAAGTTAAGGGAACAAGTAAAGAATGCTGAAACTACCAAGGTTCAAGCTCTTGTGGAGCTCGAAAGGGCGAAAAGAACAGTTGAGGATCTGACACAGAAGATGAAAGTTATTGGTGATTCTAGGGAATTAGCGATCAAGACAACCGAAGCTGCAAAGAGTCAGGCAAAACAACTTGCAGAAGAAAAGTATGGTATCCCTGACGTAACAGGTGGTGCTTGGAAGGAAGAATTAGATTCTGCAGTAAAAAGGTATGCATCTGTCATGACAGAACTTGATGCAGCAAAGCAAGTATTAAGCAAGACTCGACAAGAGTATGATTCATCCTTGGATGCAAAAAAGTCTGCTTTCAAGCGAGCAGCAGAAGCTGAAGATGGATTGAAGGAAAACACAGAAAGAGCATCTGAGCTTTCTAAAGAAATTTCATCTGTAAAGGAATCAATTGAGCAAGCAAAGCTTGCATCTATTGTGGCACAGCAACAGCAAGCAATGATTTTGGCTGAGAAAGATGTTCTAAGACAATCGTATAAAGCTACCCTGGAACAATCTGAAAAGCAATTGCTTGCTTTAAAGAAGGAATTCAGTCCTGAGCTTTCCAAGAATCTTGAAATGCAGCTGGAGGAGAGAATGAGTGAAATTGGGGCTCTTCAAAAGGAAATGGAAAATAAAAGGACGTCGGACTTGGACTCTGTTAAAAGTGTCACTTTGGAGCTTGATGATGCTAAGGAGTCACTGCAGAAAGTAGCAGATGAAGAAAGCTCTCTTAAAAGCTTAGTGGAATCTCTCAAGGTGGAACTGGAGAATGTAAAGAAAGAACATTCTGAGTTGAAGGAGAAGGAATCTGAAACTGAATCCATTGTTGGGAATCTGCACGTCAAGCTCCGCAAAAGTAAGTCCGAGCTTGAAGCCTGCATGTCAGAAGAATCTAAAGTTAGAGGTGTATCTGAAGAAATGATCTTGACACTTAGCCAGCTGACATCTGAAACTGAAAATGCAAGGCGGGAAGCAGAAGATATGAAGAAAAAAACAGAAGAATTGAAGAAGGAAGCTGAAGTTACTGGACTAGCATTAGCAGAAGCAGAGAGAAAGCTTAAAGTGGCACTGGAAGAAGCAGAAGCAGCAAAAGCAGCCGAGAAAAGAGCTCTTGACCAGATTACAGTGTTAACTGAAAGAACTACTGCTGCTCGTGCATCCACATCTGAATCTGATGCTGTGATTACAATCTCAAAAGATGAGTTTGATTCACTAAGCCATAAAGTTGAGGAGTCTGACAAATTAGCAGACATGAAAGTGGCTGCTGCCAAGGCACAGGTTGAAGCTGTGAAGGCTAGTGAAAATGAGGCTCTCAAAAAGTTAGAGACAACTCAGAAGGAAATTGAGGATATAAAGGCTGCAACACAAGAGGCCCTCAAAAAGGCTGAAATGGCTGAAGCAGCAAAAAGGGCAGTGGAGAGTGAGCTCCGAAGATGGCGTGAGAGGGAGCAGAAGAAGGCTGCAGAAGCTGCATCCCGAATTTTGGCTGAGACACAGGTGTCAACAGAATCATCACCTCAGCACTACAGGATTCAAAAGCAGAATCATCCTCATACAACTGCAGAGGTGAGGAAGTTTGAAAAGGAGAAGGTTTCAGTTTCAAAAAAAGCCCTCTTGCCTAATATTAGCGGCATCTTCCATAGGAAGAAAAACCAGGTTGAGGGTGGCTCTCCTTCTTATCTGCCTGGTGAGAACCCTCTATGA 1962 0.4266 MVAKIRQSATESPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPFIKKAKPYSAERVLAKETQLHVAQKELNKLREQVKNAETTKVQALVELERAKRTVEDLTQKMKVIGDSRELAIKTTEAAKSQAKQLAEEKYGIPDVTGGAWKEELDSAVKRYASVMTELDAAKQVLSKTRQEYDSSLDAKKSAFKRAAEAEDGLKENTERASELSKEISSVKESIEQAKLASIVAQQQQAMILAEKDVLRQSYKATLEQSEKQLLALKKEFSPELSKNLEMQLEERMSEIGALQKEMENKRTSDLDSVKSVTLELDDAKESLQKVADEESSLKSLVESLKVELENVKKEHSELKEKESETESIVGNLHVKLRKSKSELEACMSEESKVRGVSEEMILTLSQLTSETENARREAEDMKKKTEELKKEAEVTGLALAEAERKLKVALEEAEAAKAAEKRALDQITVLTERTTAARASTSESDAVITISKDEFDSLSHKVEESDKLADMKVAAAKAQVEAVKASENEALKKLETTQKEIEDIKAATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAASRILAETQVSTESSPQHYRIQKQNHPHTTAEVRKFEKEKVSVSKKALLPNISGIFHRKKNQVEGGSPSYLPGENPL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02354 653 MobiDBLite consensus disorder prediction 405 420 - -
Vimu2g02354 653 MobiDBLite consensus disorder prediction 576 607 - -
Vimu2g02354 653 Coils Coil 274 294 - -
Vimu2g02354 653 Pfam Weak chloroplast movement under blue light 21 571 IPR008545 -
Vimu2g02354 653 MobiDBLite consensus disorder prediction 1 27 - -
Vimu2g02354 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 20 626 - -
Vimu2g02354 653 Coils Coil 397 463 - -
Vimu2g02354 653 Coils Coil 61 116 - -
Vimu2g02354 653 Coils Coil 248 268 - -
Vimu2g02354 653 MobiDBLite consensus disorder prediction 401 420 - -
Vimu2g02354 653 Coils Coil 195 229 - -
Vimu2g02354 653 Coils Coil 510 568 - -
Vimu2g02354 653 Coils Coil 306 361 - -
Vimu2g02354 653 MobiDBLite consensus disorder prediction 581 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02354 Vimu-Chr2 19065044 19068583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02354 - - gmx:100794569 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02354 2 19065044 19068583 Vimu1g00288 1 1688257 1691029 PCT