Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02353 ATGGAGATATATAGGAGATTAACCCATTTTGATGTTGAGACATTTGTTGAAGAAGTTATTGTCAAGGAAGGAGAATGGCTTCCTGGAAATCCTGAATCCTTAAAAGCTTCATACGTTTTCGTCTGCTCTCATGGATCACGTGATCGTAGGTGTGGGGTTTTTGGACCTGTCTTGGTCAGTAGATTCAGGGAAGAGATAGGGTTACATGGCCTCCAAGGCAAAGTGTTGGTTAGCTCCTGCTCTCACATTGGGGGCAACAAGTATGCAGGAAATGTCATTATAATCGGATCGAGCATCAACGGTGAAGTCACAGGCCACTTGTAA 324 0.4383 MEIYRRLTHFDVETFVEEVIVKEGEWLPGNPESLKASYVFVCSHGSRDRRCGVFGPVLVSRFREEIGLHGLQGKVLVSSCSHIGGNKYAGNVIIIGSSINGEVTGHL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02353 107 Gene3D Glutaredoxin 36 106 - -
Vimu2g02353 107 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 2 106 IPR009737 -
Vimu2g02353 107 SUPERFAMILY Thioredoxin-like 38 95 IPR036249 -
Vimu2g02353 107 Pfam Sucrase/ferredoxin-like 2 95 IPR009737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02353 Vimu-Chr2 19050064 19050527 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02353 - - vun:114187290 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02353 2 19050064 19050527 Vimu2g02353 2 19050064 19050527 ECH
Vimu2g02353 2 19050064 19050527 Vimu1g00287 1 1683766 1686535 PCT