Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00287 ATGGCGAGTAACAGAGAGAGAGAAGAGTCTCTGACATTCACAATCCCTTCTTCCTCTTCTCATTCTTCCCCTATCACCGTCTCCGACCAACTCGACAGCTACCTCGCCGACCCCAGAAGCGCCTCCGGAAGCTTCCAGAACGATGGCCTTCTCTCCTCCGCCGACGCCGCCGCCGATCCCGATTTTGGATTCTCCCGCCCCGATTTTCGTCAGAGTCCCCTCGCCGGCACCGTCGAGTTCTACCAACGCCACGTCTTCTTATGCTATAAGAACCCTCGCGTTTGGCCACCGCGCATAGAAGCCGCCGAATTCGATCGCTTGCCGAGGTTGCTTCACGCTGCCGTTGTCGCAAGAAAACCTCACATGAAAAAGGAGACTCGGTTAACGATTTGCGAGGGTCATGATGGAACTGAGACATCCAATGGGGATGTGTTGATCTTTCCTGACATGGTCAGATACAGGAGGTTAACGCATTTTGATGTTGAAACGTTTGTTGAAGAGGTTCTTGTGAAAGATGGGGAATGGCTTCCTGGAACCCCTGAGGCATTGAGAGGTTCGTTTGTTTTTGTGTGTTCGCATGGATCCCGTGATCGCAGATGTGGGGTTTGTGGACCTGTCTTGGTCAGTAGATTCAGGGAGGAGATAGAGTTACATGGTCTTCAGGGTAAAGTGTTTGTAAGCCCGTGTTCTCACATTGGGGGAAGTCAGTATGCTGGAAACGTCATTGTATTTGGACCTAGCATGAATGGAGAAGTCACTGGCCATTGGTATGGATATGTTACCCCGGATGATGTGCCTTTATTGCTGCAACATCATATCATGAAAGGGGAGGTTTTAGATTCACTATGGAGGGGTCAGATGGGTTTCTCAGTAGATGAACAGCTGAGTAAGCAAGAACAAAGGCTTCTGCTGAATGGCTTAAGAAATTTAGAAGAAAGCACTGAAGTGTCTAGATCTCAAGAAAATTTTGTGAGCTGCTACCAATCAAATGCTAGCTGCTGTCAATCAAATGCTGGCTGCTGCCAGTCAAATGGAGACTCTTCTTTCCATCAGAATCACGTTTTAGTGGAAAAGAGATTGGACCCTGATGTCATTGAGGCAGAGGCAAAGCTCTCAGCTGATAATAAGAACAACGACTCTGTGTTTTCTCGGATGAATAGTGGCAAAGGAGCTTCACGCAAGTTTCCTTCTGTGACAACTTGGCTCGATGGTTGGGAGCAAGAAGATACATACGCAGCTCTTGCTGTTGTATGTGCTGCTGTGTCAGTTGCCATTGCCTACAACTGCTACAGGCAATTGAGATAA 1305 0.4835 MASNREREESLTFTIPSSSSHSSPITVSDQLDSYLADPRSASGSFQNDGLLSSADAAADPDFGFSRPDFRQSPLAGTVEFYQRHVFLCYKNPRVWPPRIEAAEFDRLPRLLHAAVVARKPHMKKETRLTICEGHDGTETSNGDVLIFPDMVRYRRLTHFDVETFVEEVLVKDGEWLPGTPEALRGSFVFVCSHGSRDRRCGVCGPVLVSRFREEIELHGLQGKVFVSPCSHIGGSQYAGNVIVFGPSMNGEVTGHWYGYVTPDDVPLLLQHHIMKGEVLDSLWRGQMGFSVDEQLSKQEQRLLLNGLRNLEESTEVSRSQENFVSCYQSNASCCQSNAGCCQSNGDSSFHQNHVLVEKRLDPDVIEAEAKLSADNKNNDSVFSRMNSGKGASRKFPSVTTWLDGWEQEDTYAALAVVCAAVSVAIAYNCYRQLR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00287 434 Gene3D Glutaredoxin 186 285 - -
Vimu1g00287 434 MobiDBLite consensus disorder prediction 1 26 - -
Vimu1g00287 434 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 39 421 IPR009737 -
Vimu1g00287 434 Pfam Sucrase/ferredoxin-like 74 285 IPR009737 -
Vimu1g00287 434 FunFam APD1p protein 185 284 - -
Vimu1g00287 434 SUPERFAMILY Thioredoxin-like 187 289 IPR036249 -
Vimu1g00287 434 CDD TRX_Fd_Sucrase 185 287 IPR009737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00287 Vimu-Chr1 1683766 1686535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00287 - - gmx:100816329 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00287 1 1683766 1686535 Vimu1g00287 1 1683766 1686535 ECH
Vimu2g02353 2 19050064 19050527 Vimu1g00287 1 1683766 1686535 PCT