Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02312 ATGGATGGGAAAAGCTCTCTACAAATAACTAGAAGTGGTACGGGTGATTATGATGATGATGGACATGCCAGAAGGACTGGGAATTTGAAGAGTGCTGTAGCTCATATCATTACTGCTGTTATTGGTTCTGGTGTTCTTTCTCTTGCATGGAGCACTTCTCAATTAGGGTGGATTGGAGGGCCAATTGCCCTGCTTTGTTGTGCAATTGTCACCTATATTTCTTCATTCCTTCTGTCTGATTGCTACAGAACTCCTGATCCTGTAACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAACTTATCTTGGTATTAAAAGAACATGGATAGCTGGCTTCCTTCAATTTTTGACTTTATATGGGACTGGTATTGCATATGTTCTAACCACAGCAACATGTCTGGGGGCAATTCTGGCATCAAATTTCTATCACAAGAAAGGGCATCAAGCTCCTTTTCATTTTCAGGGGAACCTGTATATGGTGATGTTTGGAGTTGTTCAAATTGTAATGTCATTCATACCAGATCTCCATAACATGGAATGGGTTTCAGTTGTTGCCGCACTCATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGTATAGCAACAGTCATAAAAAATGGAAGAATTATGGGGAGTTTGTCAGGAATACCAACTGATACAGTTGCTGACAAATTTTGGGCAGTCTTCCAAGCACTTGGTGATATTGCCTTTGCCTATCCATACTCAATTCTCCTTCTTGAGATTCAGGACACTTTAGAGTCTCCTCCACCAGAAAACCAGACCATGAAAAAGGCCTCAATGGTTGCAATATTCATTACAACATTCTTCTACCTGTGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATCAGACACCAGGAAATCTCTTGACAGGCCTTTTGAAAGGGTCTGGGTTTTATGAGCCTTTCTGGCTTGTTGACCTTGCTAATGTTTGCATCATTATTCATTTGGTTGGAGGATATCAGGTCTACAGTCAACCTATATACAGTACTGCTGATAGATGGGCTTCAAGAAGATTCCCCAACAGTGGGTTTGTGAACAATTTCTACAAAGTGAAACTGCCTTTAGTTCCTGGTTTTCAGCTAAACCTTTTCAGGTTCTGTTTTAGAACAACCTATGTGATTACAACAGTTGGTGTTGCAATCTCGTTTCCTTACTTCAACGAAATTCTAGGAGTGTTAGGAGCCATAAACTTCTGGCCATTGGCTATATACTTCCCTGTAGAGATGTACTTTGTGCAGCACAAAGTTGCAGCTTGGAGTAGAAAATGGATTGTTCTCAGAACATTCAGCTTTGCATGTTTTCTTGTGAGTGTAATGGGGTTAGTTGGATCAGTTGTTGGCATTGTAAAAGAAAAACTGAGCTGA 1398 0.4056 MDGKSSLQITRSGTGDYDDDGHARRTGNLKSAVAHIITAVIGSGVLSLAWSTSQLGWIGGPIALLCCAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVRTYLGIKRTWIAGFLQFLTLYGTGIAYVLTTATCLGAILASNFYHKKGHQAPFHFQGNLYMVMFGVVQIVMSFIPDLHNMEWVSVVAALMSFTYSFIGLGLGIATVIKNGRIMGSLSGIPTDTVADKFWAVFQALGDIAFAYPYSILLLEIQDTLESPPPENQTMKKASMVAIFITTFFYLCCGCFGYAAFGNQTPGNLLTGLLKGSGFYEPFWLVDLANVCIIIHLVGGYQVYSQPIYSTADRWASRRFPNSGFVNNFYKVKLPLVPGFQLNLFRFCFRTTYVITTVGVAISFPYFNEILGVLGAINFWPLAIYFPVEMYFVQHKVAAWSRKWIVLRTFSFACFLVSVMGLVGSVVGIVKEKLS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02312 465 PANTHER OS05G0424000 PROTEIN-RELATED 31 457 - -
Vimu2g02312 465 MobiDBLite consensus disorder prediction 1 22 - -
Vimu2g02312 465 Pfam Transmembrane amino acid transporter protein 26 460 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02312 Vimu-Chr2 18493827 18498245 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02312 6 447 Organic Solute Cotransporters AT1G77380 51.461 4.63e-173 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02312 K24917 - gmx:100818535 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00261 1 1518317 1527374 Vimu2g02312 2 18493827 18498245 PCT