Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01958 ATGTGGGGTAGGTGGCGGTGGTGTGCTGGTGGGAGTTTTCTGAGGCAAAGGGTATCTGCAATTGGTAGTGTTAGTCATGGTCATAGGGAAAAGCTTCATCCTTTTGATCCTCCTTTGATGTGTGATGGAAGAAGGGGTGGTGGTGGGATGACGCCTTTATCTTTTCTGTTGAATCAAATAAAGAGGGGTGTATCAACTTCAACTGGGGGTGGGGGTGTCAGCAATGGCAATGAAAGAGAAGATTTTATATCATTCTCGGAAGCCAAGAAGCTTATGAGGTTGGTGAATGTGGAGTCCCTCAAGATGAAGCTTGGTATGGAAGGGAAGGAAGTTATTTGCTATTCTGAGCTTCTTGAGGCCTGTGAGAGCATGGGGATTGCCAGGAGTCCTGAAGAGGCTGCAGCTTTTGCTAGGGTTCTTGATGAGGCTGGGGTTGTTCTCCTCTTCCGGGACAAAGTGTATTTGCATCCTGATAAGGTGGTGGATTTGGTTCGTAGAGCCGTTCCATTGGCACTGACTGCTGAGAACGATCCTATAAGGGAGGAGTTGAAGATTCTGCAGGAGAAGAAAGAGGAAATTGATGTGTTGGCACATAAGCAGGTGCGGCGCATCCTCTGGTCTGGACTAGGATTCGGCGTAGTGACAGTGAGCCTCTTTTTCAGGCTAACTTTCTGGGAATTTTCATGGGATGTAATGGAGCCAATTGCATTTTTTACGACAACCACAGGATTGGTCATAGGCTATGCATACTTTTTGTTCACTTCAAGAGACCCTACTTACCAAGACTTAATGAAGAGGCTTTTTCTTTCAAGGCAGAGGAAGCTTTTCAAGAGGCATAATTTTGACATTGAGAGATTCAAGGAGCTCCAATGCAAGTGCAAAACACCTTTACATGCTAGTACCGTTTTAAAAAATCGCATAGGGGTGGAACTGGATCTTGAAGATGCTTTACATAGAGATTAA 963 0.4528 MWGRWRWCAGGSFLRQRVSAIGSVSHGHREKLHPFDPPLMCDGRRGGGGMTPLSFLLNQIKRGVSTSTGGGGVSNGNEREDFISFSEAKKLMRLVNVESLKMKLGMEGKEVICYSELLEACESMGIARSPEEAAAFARVLDEAGVVLLFRDKVYLHPDKVVDLVRRAVPLALTAENDPIREELKILQEKKEEIDVLAHKQVRRILWSGLGFGVVTVSLFFRLTFWEFSWDVMEPIAFFTTTTGLVIGYAYFLFTSRDPTYQDLMKRLFLSRQRKLFKRHNFDIERFKELQCKCKTPLHASTVLKNRIGVELDLEDALHRD 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01958 320 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 69 294 IPR039055 GO:0051560
Vimu2g01958 320 Pfam Mitochondrial calcium uniporter 131 289 IPR006769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01958 Vimu-Chr2 14263139 14265411 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01958 K20858 - gmx:100784357 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01958 2 14263139 14265411 Vimu2g01958 2 14263139 14265411 ECH
Vimu2g01958 2 14263139 14265411 Vimu1g01217 1 9502419 9504191 PCT