Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01592 ATGTTTACAAGCTCTGATGAACCAATTGGTTATGCTTTTGATCCCGTTTTTCGTAAATGGTATAACATTGAACTTCCATGCATTGGAACATCAAATTGGTTCATTGCTTCATCGATTGGCATGGTCTGCTTCATGGACAATGACAGCAGAAGTGAATTATGCATCTGCAACCCAATCACCAAGACCTACAAGAAGCTGGAGGAGCCTCCTGGTTTGAAATTTTCTGATTACAGTGCATTAGCAATCTCAGTGAACAGGGAATCTCACATTTATTCTGTGGCAATTGTAAAATCTAAACAAGTTCCCGAGAACTTTTTCCAGTGGGATATCTCGATTCACGTATACAATTCAGTAAACAGAACCTGGGTGACGACTTTAACTGAAGTTTTGATGGGGTGGAGAGGTGGTGATGAGAGTGTTATATGCAATGGGATGCTATACTTTCTAGTTTATTCAACTGGGGGTGGTCAACCGGAAAATCGTCATGCCCTGATTGCATATAACATGTCTAACCGTTCTTCTCAAGGTAGCTTGACAAGGAGCTTCATTCCAGTACCTTGTTCTCTAACCTGTGGCCGTCTGATGAATCTGAAGGAGAAACTTGTAATGGTAGGAGGAATTGGCAAACCCGATCGACCTGACATAATAAAAGGAATTGGTATTTGGCTTCTAAATGATAAGACGTGGGAAGAAAAGTTTGATGATGTTTTTGCCAGCAGTGGTGCAGATGATCTGATATACATTCAGAGTTATGGAGCTCCGGCGCTTCTCATATTTGACACCAACCATAAACAATGGAAGTGGTCTCAGAAGTGCCCTGTGACAAAACGATTCCCGCTGCAGCTTTTTACTGGCTTTTGCTTTGAGCCCAGACTTGAAATAGCTCCCTAG 891 0.4198 MFTSSDEPIGYAFDPVFRKWYNIELPCIGTSNWFIASSIGMVCFMDNDSRSELCICNPITKTYKKLEEPPGLKFSDYSALAISVNRESHIYSVAIVKSKQVPENFFQWDISIHVYNSVNRTWVTTLTEVLMGWRGGDESVICNGMLYFLVYSTGGGQPENRHALIAYNMSNRSSQGSLTRSFIPVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLNDKTWEEKFDDVFASSGADDLIYIQSYGAPALLIFDTNHKQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01592 296 PANTHER F-BOX FAMILY PROTEIN 1 293 IPR045048 -
Vimu2g01592 296 FunFam F-box/kelch-repeat protein At3g61590 family 1 280 - -
Vimu2g01592 296 SUPERFAMILY Galactose oxidase, central domain 53 273 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01592 Vimu-Chr2 11207795 11208724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01592 - - gmx:100817678 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01592 2 11207795 11208724 Vimu9g00191 9 2410058 2411275 PCT