Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00782 ATGGCTGAAAGGAAATTGAATATTAATGCCCCTCTCATGTCTGTGAGACGTGCTTCTGCCACATCACCGTCCTTGACGGAAGCAAGGAAAAAGATTCTAGAGAAACGTCACAGTCTCCCATACCACAAATCAGACACGACCTTGGATCAGGTAACAAAACCAGTTGCAGTTCCTTTCAATTGGGAGCATATCCCTGGAAGACGCAAGGGCAATGGTGGATCTGAGCCTCATCCTCCCAAGGCCACTTCAATCACTCCAAGCCCAAGGCTTCCTCCAGGAAATTCAACCAATGCTACCAAACAACCATCGGAAAGGGAAAATAAAGCTGCGAATAAATTCAAGTCCTCAAATAAGTCCAAGTCGTTCAACGTCAGTGTGGCAAAAGTAGACACTGAGAAAGAAAGAAAAACAGAGAAGACAGAGAAAATAGTTGAGAACAGAAGGTCCAATGTGAAGTATGATGAGGATGATGACAATGATGCCTTTTCTGATGCTCTTGAAACATTGTCACATACAGAATCATTCTCTATGAACTGTAGTGTGAGTGGTGTAAGCGGGTTAGAGAGTATGGGTGCAAACAAGTCTGGAACCTTTTCCACAGATCAACAGACTATAGACTTCATGATGAGCCGATTCTTGCCTGCTGCAAAGGCTATGACTCTACAGCCTCCTCAATATTCTTCAAAAAAGCAATCTGTACTGGTAGAACAACAACCTAGAGATATTAGCAAATTGATTCGCGAGGAAAAGAAGCAATTGTCTAATAAGCACAACACTGCTATTATACCATACACTGGCCAAGATCAAGAGGAAGAAAGTGAAGACGAAGGTGATGGTAACGAATATGACAACTCTTCTAATATTGCAGCTAAAGGCTGTGGGTTGTTACCTCAATTACATATCAGGAATTCATTGTGCTTAATGAATCCTGTGGCTGCGATGAAAATGAAAAACCAGGTTTCCTTGCCTTCAGCCAGTGAGGTTGTGAAACCTAACAAAACTTCTCATATTAGATCTTTTAGCCCAATTCCAGCTGTAAAGAAGGCTTGGGATGCAATTCACAGGAACAAATCAAGCTCCAGGGCACCGTCACCTGACAAGCAAGAGGGTAAAAAGAAATTGAATAGTGAATCAAATAGATTTACCTATTCTGGTGAATTACTTCCAGGTAGACTCTCTCCCTTCCGTCGCTCAAGAGCAGCTGCTACTGGTATATCTCCGTCTCGAAGACCTCAATCTCCCTTTCGTGGCGTCAAGTTGCTTGGTGATTCTAGAGAAGCTGAAAATTACAAGTTTGGCAAGGTGAAATTCCACAGCGGTGTGCTCGGAAATGTTCAAGATGTGCAGTCCCAAGGAAACAAAAAAACTTCGTATTCAGGTAGTCTCACACTTGAAAAGACATTGTACATAGATACAGTCAGCACAGCGAATTTACCATCTTCAAATGTAAGTTCTTTGGATAACAAACGGAGGGTAGATACCATGGTTGCAGACTTAGAGAGAAGAAGGGGGAAAGAAAGTAATTCTTCCATAGGATCTTCTGGAGATATAAAACAAGTACAATATGCTGTGGAAGAAAAGGTCACGTTTGATACTGAAGTGTTAAACTCTTTAGATTCCATTCCACCGAGTTTGTATAGAATTTTGAATCTGACAGCCAAAGAAGGCAAAACTGAAGGATTGACAACTGATGAAAATATTAACCAAGAACCCGAGTCGTCCTTGCCACTTTGGCAAGGGACATTAGTTGAAGATTCAAAGATCAATGCCCAGCAAATTGTTTTAGTTAATGATTCAGGAAAGCATAGTTCTGACTCTGTCGTGTCTCCTCTTCCCCCACCATTACCAAAATCACCTTCCGAGTCCTGGCTTTGGCGTGCCCTGCCTTTAGTTTCTGTGAAGAATTCTTTCCTGCACTCGAGTCAAGGTACTCAATCCCAAGCTAAGAGGCATGATTCTAATGCAATATCTGGTAATCTCAAGTGGGAAACAATAGTGAAAACTTCAAATTTACATCATGATCATGTACGCTATTCTCAGGAACTTCCGACGCATAAATCTAAGCACTAA 2070 0.4174 MAERKLNINAPLMSVRRASATSPSLTEARKKILEKRHSLPYHKSDTTLDQVTKPVAVPFNWEHIPGRRKGNGGSEPHPPKATSITPSPRLPPGNSTNATKQPSERENKAANKFKSSNKSKSFNVSVAKVDTEKERKTEKTEKIVENRRSNVKYDEDDDNDAFSDALETLSHTESFSMNCSVSGVSGLESMGANKSGTFSTDQQTIDFMMSRFLPAAKAMTLQPPQYSSKKQSVLVEQQPRDISKLIREEKKQLSNKHNTAIIPYTGQDQEEESEDEGDGNEYDNSSNIAAKGCGLLPQLHIRNSLCLMNPVAAMKMKNQVSLPSASEVVKPNKTSHIRSFSPIPAVKKAWDAIHRNKSSSRAPSPDKQEGKKKLNSESNRFTYSGELLPGRLSPFRRSRAAATGISPSRRPQSPFRGVKLLGDSREAENYKFGKVKFHSGVLGNVQDVQSQGNKKTSYSGSLTLEKTLYIDTVSTANLPSSNVSSLDNKRRVDTMVADLERRRGKESNSSIGSSGDIKQVQYAVEEKVTFDTEVLNSLDSIPPSLYRILNLTAKEGKTEGLTTDENINQEPESSLPLWQGTLVEDSKINAQQIVLVNDSGKHSSDSVVSPLPPPLPKSPSESWLWRALPLVSVKNSFLHSSQGTQSQAKRHDSNAISGNLKWETIVKTSNLHHDHVRYSQELPTHKSKH 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00782 689 MobiDBLite consensus disorder prediction 1 26 - -
Vimu2g00782 689 MobiDBLite consensus disorder prediction 356 380 - -
Vimu2g00782 689 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 1 682 - -
Vimu2g00782 689 MobiDBLite consensus disorder prediction 256 285 - -
Vimu2g00782 689 MobiDBLite consensus disorder prediction 356 376 - -
Vimu2g00782 689 MobiDBLite consensus disorder prediction 127 141 - -
Vimu2g00782 689 Pfam Protein of unknown function (DUF688) 1 485 IPR007789 -
Vimu2g00782 689 MobiDBLite consensus disorder prediction 87 104 - -
Vimu2g00782 689 MobiDBLite consensus disorder prediction 55 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00782 Vimu-Chr2 4789857 4792114 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00782 - - gmx:100786935 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00782 2 4789857 4792114 Vimu2g00782 2 4789857 4792114 ECH
Vimu2g00782 2 4789857 4792114 Vimu5g01238 5 21985744 21988060 ECH