Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00591 ATGTCTTCATATTTTTCAAGCTTTGGTACAAAAATCCCACGTATGGGGAAGGGGTACGATGATGTCTTCACAGTGACCAAGACCAAGCATGCAGTGAAGCAACCGGTTTCATGCTCTAACTATAAACTGCCCAATAATCTCTCAACGCAGCACATTGGTTTTGTGTCAAAATTTCCCGTGATGGAGGAGGAGCAGCAGAAAAGGTTGGATGTTTTGCCTGAGTTATCGGAGGATTATTCCAAGGAATTGGAGGTGGCTGTTAGAGCAGTGCAGATGGCGTGTTCCCTCTGCCAGAGAGTGCAGGACACTATAATTTCCAACACTGGGTCTGTCACCAATCATCGTCAGGTGCAGTCCAAGGATGATAATTCTCCGGTTACAGTAGCAGATTGGAGTGTTCAAGCAATTGTCAGCTGGATGTTGTCAGAATGTTTAGGGAGTCAAAATGTCTCGATTGTTGCTGAAGAAGATGTTCAAAGTCTGTCCAAAGCTAATTCATCTGAACTATTAGAAGCTGTGGTTGAAACTGTGAACCAATGTCTAGCTGAAGCACCTCGATTTGGAGTTCAGGAGCCAGAATGTGGTCTTTCAACTTCAGATGTTCTTGAAATCATTGGTCGCTGTAGCTCAACGGGGGGTCCCACCGGAAGATTTTGGGTACTGGATCCTGTTGATGGCACATTGGGTTTTGTACGTGGAGATCAATATGCTGTAGCTCTAGCACTCATAGAGGATGGAGAAGTGAAGCTTGGTGTTCTTGGATGTCCTAACTACCCAATGAGGAAGGAATGGTTAAGTTATCATCACCGCTATCATAGGATTATATCCAAGTTGACTCCTCCAACAGCTGAAACTTGGAACAAAGGTTGTGTACTATATGCTAAAAGGGGTAGTGGGAAGGCTTGGATGCAACCGCTGATCCATGTCAATAAGATGTTTGTGTGGCCAAACCATGCAAAACAAGTTTCTGTCTCTCCCATTGACAATCCTGCACTTGCCACCTTCTGTGAACCAGTTGAGAAGGCCAATTCAAGCCATTCTTTTACTGCAGGGCTGGCTCACACTATTGGTCTCAGGAAACAACCGTTGAGGGTATACAGCATGGTAAAGTATGCAGCAATAGCTCGTGGGGATGCTGAGGTTTTCATGAAGTTTGCAAGGGCTGGTTACAAGGAGAAAATATGGGATCATGCTGCAGGTGTTATCATCATACAGGAAGCAGGTGGGATGGTAACAGATGCAGGAGGACTTCCCCTAGACTTCTCAAAAGGCTTATATTTAGAAGGCCTTGATCGTGGCATAGTTGCTTGTTCTGGAGCCACACTACATGCAAAGATCATTGATGCAGTTGATGCTAGCTGGGGCTCTTCTGGCCTCTGA 1380 0.4536 MSSYFSSFGTKIPRMGKGYDDVFTVTKTKHAVKQPVSCSNYKLPNNLSTQHIGFVSKFPVMEEEQQKRLDVLPELSEDYSKELEVAVRAVQMACSLCQRVQDTIISNTGSVTNHRQVQSKDDNSPVTVADWSVQAIVSWMLSECLGSQNVSIVAEEDVQSLSKANSSELLEAVVETVNQCLAEAPRFGVQEPECGLSTSDVLEIIGRCSSTGGPTGRFWVLDPVDGTLGFVRGDQYAVALALIEDGEVKLGVLGCPNYPMRKEWLSYHHRYHRIISKLTPPTAETWNKGCVLYAKRGSGKAWMQPLIHVNKMFVWPNHAKQVSVSPIDNPALATFCEPVEKANSSHSFTAGLAHTIGLRKQPLRVYSMVKYAAIARGDAEVFMKFARAGYKEKIWDHAAGVIIIQEAGGMVTDAGGLPLDFSKGLYLEGLDRGIVACSGATLHAKIIDAVDASWGSSGL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00591 459 ProSitePatterns Inositol monophosphatase family signature 2. 395 409 IPR020550 GO:0046854
Vimu2g00591 459 Gene3D - 78 312 - -
Vimu2g00591 459 PRINTS Inositol monophosphatase superfamily signature 392 416 IPR000760 -
Vimu2g00591 459 PRINTS Inositol monophosphatase superfamily signature 219 235 IPR000760 -
Vimu2g00591 459 Pfam Inositol monophosphatase family 122 453 IPR000760 -
Vimu2g00591 459 ProSitePatterns Inositol monophosphatase family signature 1. 219 232 IPR020583 -
Vimu2g00591 459 PANTHER PHOSPHATASE 71 456 - -
Vimu2g00591 459 SUPERFAMILY Carbohydrate phosphatase 78 452 - -
Vimu2g00591 459 CDD PAP_phosphatase 82 450 - -
Vimu2g00591 459 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 79 457 IPR006239 GO:0006790|GO:0008441
Vimu2g00591 459 Gene3D - 323 453 - -
Vimu2g00591 459 FunFam PAP-specific phosphatase HAL2-like 323 456 - -
Vimu2g00591 459 FunFam PAP-specific phosphatase HAL2-like 77 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00591 Vimu-Chr2 3461407 3465166 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00591 K01082 - gmx:100776247 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00591 2 3461407 3465166 Vimu2g00591 2 3461407 3465166 ECH
Vimu11g03534 11 56791561 56793929 Vimu2g00591 2 3461407 3465166 PCT